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Table 3 Differential expression of genes between pairwise comparisons of embryo stages

From: Transcriptome analysis of embryo maturation in maize

Comparison stages

No. of genes tested1

Differentially expressed2

│log2FC│3≥ 1

Up-regulated (≥ 1)

Down-regulated (≤ 1)

S15 vs S21

12,186

4,890

2,812

1,481

1,331

S21 vs S27

11,157

4,032

2,499

1,243

1,256

S27 vs S15

11,049

5,085

3,590

1,585

2,005

  1. [1] Number of genes with 50 total reads combined from the two data sets in the pairwise comparison.
  2. [2] p-value < 0.001 and q-value < 0.001. [3] Absolute value of log2 (fold change).
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BMC Plant Biology

ISSN: 1471-2229

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