Table 3 Analysis of genes predicted from the repeat-masked sequence between the 215.47-kb interval of the markers B4/R1-2
Predicted gene | Length of gene | First hit | E-value | Query coverage | KEGG entry |
|---|---|---|---|---|---|
1 | 403aa | putative cycloartenol synthase | 1.00E-129 | 76% | AT2G07050 |
2 | 137aa | 60S ribosomal protein L24 | 7.00E-04 | 16% | AT3G53020 |
3* | 119aa | thioredoxin H-type | 4.00E-64 | 100% | AT5G39950 |
4 | 239aa | putative transposable element | 2.00E-29 | 89% | AT3G22220 |
5* | 360aa | putative cycloartenol synthase | 1.00E-74 | 60% | AT2G07050 |
6 | 618aa | sucrose synthase2 | 4.00E-52 | 36% | AT4G02280 |
7 | 342aa | salT gene product | 3.00E-20 | 100% | AT1G19715 |
8 | 93aa | no significant similarity | NA | NA | NA |
9 | 330aa | hypothetical protein cauri_1913 | 3.30E+00 | 53% | NA |
10 | 455aa | hypothetical protein | 2.00E-107 | 98% | NA |