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Table 2 Number of alleles, percentage of missing data (MD), observed (Ho) and expected (He) level of heterozygosity, and F IS in three germplasm groups

From: Identification of mildew resistance in wild and cultivated Central Asian grape germplasm

Marker name Total Group A (Species) Group B (O34-16) Group C (TSL) FST
  MD (%) Alleles Hoa Heb FIS Ho He FIS Ho He FIS  
VVIp60 12.53 c 25 0.55 0.93 0.41 0.65 0.78 0.17 0.69 0.74 0.07 0.042
VVIb01 8.35 19 0.81 0.88 0.08 0.66 0.65 −0.01 0.67 0.61 −0.10 0.120
VVMD28 2.46 31 0.78 0.92 0.16 0.82 0.89 0.07 0.80 0.83 0.04 0.046
VVMD32 3.69 24 0.62 0.89 0.31 0.80 0.87 0.08 0.83 0.79 −0.04 0.057
VMC4c6 2.95 15 0.30 0.82 0.64 0.58 0.69 0.15 0.70 0.78 0.10 0.036
VrZAG79 1.97 20 0.62 0.94 0.34 0.76 0.82 0.07 0.86 0.78 −0.10 0.056
VVMD27 2.70 21 0.93 0.90 −0.03 0.72 0.85 0.15 0.82 0.75 −0.09 0.052
VMC2g2 3.69 15 0.64 0.87 0.26 0.75 0.77 0.03 0.75 0.67 −0.12 0.048
VVMD21 9.34 21 0.62 0.75 0.18 0.66 0.79 0.16 0.68 0.73 0.06 0.014
VrZAG62 2.95 20 0.62 0.83 0.26 0.80 0.87 0.08 0.79 0.79 −0.01 0.044
VVMD31 6.39 20 0.59 0.90 0.34 0.66 0.76 0.13 0.70 0.72 0.04 0.025
VVMD7 0.98 21 0.61 0.82 0.26 0.70 0.83 0.16 0.87 0.86 −0.01 0.053
VMC1b11 2.95 19 0.61 0.81 0.25 0.78 0.83 0.07 0.74 0.73 −0.01 0.054
VVIq52 4.18 9 0.26 0.82 0.68 0.57 0.70 0.18 0.69 0.68 −0.02 0.036
VVIv37 3.93 22 0.64 0.93 0.31 0.74 0.89 0.16 0.70 0.86 0.18 0.016
VVMD25 2.46 21 0.89 0.93 0.04 0.77 0.79 0.02 0.88 0.80 −0.10 0.030
VVS02 1.47 18 0.76 0.90 0.15 0.81 0.88 0.08 0.90 0.87 −0.03 0.038
VMC4f3.1 1.47 34 0.86 0.94 0.08 0.85 0.92 0.07 0.83 0.84 0.02 0.040
VMC8g9 3.69 24 0.66 0.89 0.26 0.71 0.81 0.12 0.77 0.77 −0.01 0.031
VVIh54 3.93 26 0.86 0.92 0.06 0.68 0.80 0.14 0.71 0.74 0.04 0.033
VMCNg4e10.1 2.95 23 0.79 0.89 0.11 0.84 0.87 0.03 0.92 0.86 −0.06 0.038
sc47-18 3.44 30 0.85 0.94 0.10 0.79 0.91 0.12 0.90 0.90 0.00 0.027
SC08-0071-014 4.42 26 0.77 0.93 0.17 0.71 0.86 0.17 0.79 0.79 0.00 0.035
UDV124 10.57 35 0.79 0.90 0.12 0.85 0.91 0.07 0.85 0.81 −0.05 0.052
VMC3d12 5.90 31 0.86 0.94 0.08 0.82 0.90 0.09 0.89 0.88 −0.01 0.027
VVMD24 2.95 17 0.64 0.77 0.17 0.69 0.74 0.05 0.75 0.76 0.02 0.060
VVIv67 7.62 44 0.38 0.91 0.59 0.66 0.84 0.20 0.60 0.72 0.16 0.056
VVMD5 1.72 20 0.72 0.89 0.18 0.82 0.87 0.05 0.83 0.80 −0.04 0.040
VVIn73 2.95 10 0.59 0.74 0.19 0.49 0.52 0.06 0.49 0.56 0.12 0.080
UDV108 4.67 33 0.86 0.94 0.08 0.67 0.87 0.23 0.70 0.77 0.09 0.036
VMC7f2 5.41 13 0.69 0.69 0.00 0.63 0.69 0.09 0.71 0.74 0.04 0.023
VVIn16 4.42 13 0.50 0.66 0.24 0.51 0.62 0.18 0.69 0.67 −0.03 0.117
VMC2g6 3.19 10 0.41 0.49 0.15 0.35 0.39 0.10 0.41 0.37 −0.11 0.201
VVIp31 2.70 21 0.70 0.90 0.22 0.87 0.91 0.05 0.89 0.88 0.00 0.025
Average 4.26 22    0.223    0.109    0.002 0.050
  1. aNo. of hterozygotes at a locus/no. of individuals typed.
  2. bExpected heterozygosity was computed using Nei (1987).
  3. cBold font within the table indicates maximum and minimum values.
  4. Estimation of FIS and FST was computed as detailed by Weir & Cockerham (1984).