Discovery, distribution and diversity of Puroindoline-D1 genes in bread wheat from five countries (Triticum aestivumL.)

Chen, Feng; Li, Huanhuan; Cui, Dangqun

doi:10.1186/1471-2229-13-125

Table 3 Known Puroindoline-D1 alleles in bread wheat

From: Discovery, distribution and diversity of Puroindoline-D1 genes in bread wheat from five countries (Triticum aestivumL.)

Pina-D1	Pinb-D1	Phenotype	NCBI No.	Molecular characterization	References
Pina-D1a	Pinb-D1a	Soft	DQ363911	Wild type	[2]
Pina-D1b	Pinb-D1a	Hard	AB262660	15,380-bp deletion	[29]
Pina-D1k	-	Hard	-	≈ 33-kb deletion	In this paper; [6]
Pina-D1l	Pinb-D1a	Hard	-	ORF shift: C deletion at position 265 of Pinb	[8, 18]
Pina-D1m	Pinb-D1a	Hard	EF620907	Pro-35 → Ser	[18]
Pina-D1n	Pinb-D1a	Hard	EF620908	Trp-43 → Stop codon	[18]
Pina-D1p	Pinb-D1a	Hard	AY599893	Val13 → Glu	[20]
Pina-D1q	Pinb-D1a	Hard	AB181238	Asn-139 → Lys; Ile-140 → -Leu	[20]
Pina-D1r	Pinb-D1a	Hard	HM572327	10,415-bp deletion	[30]
Pina-D1s	Pinb-D1a	Hard	-	4,422-bp deletion	In this paper
Pina-D1t	Pinb-D1a	Hard	JN680739	Trp41 → Stop codon	[38]
Pina-D1u	Pinb-D1a	Hard	-	6,460-bp deletion	In this paper
Pina-D1a	Pinb-D1b	Hard	DQ363914	Gly-46 → Ser	[3]
Pina-D1a	Pinb-D1c	Hard	-	Leu-60 → Pro	[9]
Pina-D1a	Pinb-D1d	Hard	-	Trp-44 → Arg	[9]
Pina-D1a	Pinb-D1e	Hard	-	Trp-39 → Stop codon	[10]
Pina-D1a	Pinb-D1f	Hard	-	Trp-44 → Stop codon	[10]
Pina-D1a	Pinb-D1g	Hard	-	Cys-56 → Stop codon	[10]
Pina-D1a	Pinb-D1p	Hard	AY581889	ORF shift: A deletion at position 210 of Pinb	[39]
Pina-D1a	Pinb-D1q	Hard	EF620909	Ser-44 → Leu	[34]
Pina-D1a	Pinb-D1r	Hard	AJ619022	ORF shift: G insertion at position 127	[40]
Pina-D1a	Pinb-D1s	Hard	AJ619021	ORF shift: G insertion and C → A at positions 127 and 205, respectively	[40]
Pina-D1a	Pinb-D1t	Hard	EF620910	Gly-47 → Arg	[18]
Pina-D1a	Pinb-D1u	Hard	EF620911	ORF shift: G deletion at position 126	[41]
Pina-D1a	Pinb-D1v	Hard	AY598029	Leu-9 → Ile	[20]
Pina-D1a	Pinb-D1w	Hard	AY640304	Pro-114 → Ile	[20]
Pina-D1a	Pinb-D1x	Hard	AM909618	C to A at position 257 and Gln-99 → stop codon	[42]
Pina-D1a	Pinb-D1aa	Hard	EF620912	ORF shift: C to A at position 96 and A deletion at position 210	[19]
Pina-D1a	Pinb-D1ab	Hard	AB302894	Gln-99 → Stop codon	[43]
Pina-D1a	Pinb-D1ac	Hard	-	G to T at position 257 and Gln-99 → stop codon	[44]

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