Figure 2

Phylogeny of AGL6 genes. The tree was produced as in Figure 1 but from complete protein sequences. The predicted peptide sequence of GmMADS3a (Glyma10g38560) was used for a BLASTP search at NCBI. The top 40 matches (E value < 1e-50) were downloaded from NCBI and filtered for duplicated or short sequences prior to phylogenetic analysis. The tree was rooted by using the gymnosperm AGL6 as the outgroup. Plants used for analysis: Agapanthus praecox, Arabidopsis thaliana, Asparagus officinalis, Bambusa oldhamii, Chrysanthemum morifolium, Crocus sativus, Dendrocalamus latiflorus, Elaeis guineensis, Epimedium sagittatum, Gerbera jamesonii, Glycine max, Gnetum parvifolium, Gossypium hirsutum, Hordeum vulgare, Hyacinthus orientalis, Lolium perenne, Lotus japonicus, Medicago truncatula, Oryza sativa, Petunia hybrida, Picea abies, Pisum sativum, Poa annua, Populus trichocarpa, Sorghum bicolor, Triticum aestivum, Vitis vinifera, Zea mays.