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Table 2 Genetic distances for gene families across monocots and Arabidopsis for entire sequences or sequence domains

From: Expression conservation within the circadian clock of a monocot: natural variation at barley Ppd-H1affects circadian expression of flowering time genes, but not clock orthologs

Sequences

N° of sequences

Domains

Overall mean distances

GIa

7

Nuclear localized protein

0.18

GI (monocots)b

6

Nuclear localized protein

0.10

CCA1/LHY

8

MYB transcription factor

0.55

CCA1 (monocot)

6

MYB transcription factor

0.27

AtCCA1 and AtLHY

7

MYB transcription factor

0.45

CCA1 and AtCCA1

7

MYB transcription factor

0.44

CCA1/LHY: MYB domain

8

MYB domain

0.05

CCA1/LHY: MYB domain (monocot)

6

MYB domain

0.01

PRRs

35

pseudoreceiver-CCT domain

0.87

PRR1

7

pseudoreceiver-CCT domain

0.39

PRR1 (monocots)

6

pseudoreceiver-CCT domain

0.22

PRR3/7

14

pseudoreceiver-CCT domain

0.51

PRR3/7 (monocots)

12

pseudoreceiver-CCT domain

0.46

PRR5/9

14

pseudoreceiver-CCT domain

0.86

PRR5/9 (monocots)

12

pseudoreceiver-CCT domain

0.90

PRRs: REC domain

35

Receiver domain

0.32

PRRs:REC domain (monocots)

30

Receiver domain

0.31

PRRs:CCT domain

35

CCT domain

0.22

PRRs:CCT domain (monocots)

30

CCT domain

0.22

  1. aArabidopsis and monocots.
  2. bonly monocots.