Table 1 Genes used in this study (* = translation manually corrected; ** = contig not covering the full coding sequence, first part of the protein is missing)
Species | Gene name |  Gene ID | Protein ID |
|---|---|---|---|
Arabidopsis thaliana | AtPRR1/TOC1 | AT5G61380 | AT5G61380 |
| Â | AtPRR3 | AT5G60100 | AT5G60100 |
| Â | AtPRR7 | AT5G02810 | AT5G02810 |
| Â | AtPRR5 | AT5G24470 | AT5G24470 |
| Â | AtPRR9 | AT2G46790 | AT2G46790 |
| Â | AtGI | AT1G22770 | AT1G22770 |
| Â | AtCCA1 | AT2G46830 | AT2G46830 |
| Â | AtLHY | AT1G01060 | AT1G01060 |
Oryza sativa | OsPRR1/TOC1 | LOC_Os02g40510 | LOC_Os02g40510 |
| Â | OsPRR37 | LOC_Os07g49460 | LOC_Os07g49460 |
| Â | OsPRR73 | LOC_Os03g17570 | LOC_Os03g17570 |
| Â | OsPRR59 | LOC_Os11g05930 | LOC_Os11g05930 |
| Â | OsPRR95 | LOC_Os09g36220 | LOC_Os09g36220 |
| Â | OsGI | NM_001048755 | Os01g0182600 |
| Â | OsCCA1 | Os08g0157600 | NP_001061032 |
Sorghum bicolor | SbPRR1/TOC1 | Sb04g026190 | Sb04g026190 |
| Â | SbPRR37 | Sb06g014570 | Sb06g014570 |
| Â | SbPRR73 | Sb01g038820 | Sb01g038820 |
| Â | SbPRR59 | Sb05g003660 | Sb05g003660 |
| Â | SbPRR95 | Sb02g030870 | Sb02g030870 |
| Â | SbGI | Sb03g003650 | Sb03g003650 |
| Â | SbCCA1 | XM_002443845 | XP_002443890* |
Zea mays | ZmPRR1/TOC1 | NM_001154351 | NP_001147823 |
| Â | ZmPRR37 | LOC100280240 | NP001146641 |
| Â | ZmPRR73 | EU952116 | ACG24234 |
| Â | ZmPRR59 | GRMZM2G135446 | GRMZM2G135446 |
| Â | ZmPRR95 | NM_001158064 | NP_001151536 |
| Â | ZmGI | BK006299 | DAA06172 |
| Â | ZmCCA1 | LOC100192868 | NP_001131529 |
Triticum aestivum | TaPRR1/TOC1 | AK333193 | in silico |
| Â | TaPRR37 | DQ885766 | ABL09477 |
| Â | TaPRR73 | Contig built from the following TC: G118.111D24F010720, TC37276, TC376302, TC377674, TC391788, TC392931, TC400719, TC418129, TC434756 | in silico |
| Â | TaPRR59 | Contig built from the following TC: BJ298369, G608.119D1, TC376876, TC393119, TC399029, TC411244, TaE05039B10R, WHE2989, wr1.pk0105.g4 | in silico** |
| Â | TaPRR95 | Contig built from the following TC: FGAS012265, TC373568, TC436795 | in silico |
| Â | TaGI | AF543844 | AAQ11738 |
| Â | TaCCA1 | HQ222606 | ADW09013* |
Hordeum vulgare | HvPRR1/TOC1 | JN603243 | Â |
| Â | HvPRR37 | AY970701 | AAY42109 |
| Â | HvPRR73 | AK376549 | BAK07744 |
| Â | HvPRR59 | AK361360 | BAJ92567 |
| Â | HvPRR95 | AK252005 | in silico |
| Â | HvGI | AY740524 | AAW66946 |
| Â | HvCCA1 | JN603242 | Â |
Brachypodium | BdPRR1/TOC1 | Bradi3g48880 | Bradi3g48880 |
| Â | BdPRR37 | Bradi1g16490 | Bradi1g16490 |
| Â | BdPRR73 | Bradi1g65910 | Bradi1g65910 |
| Â | BdPRR59 | Bradi4g24970 | Bradi4g24970 |
| Â | BdPRR95 | Bradi4g36077 | Bradi4g36077 |
| Â | BdGI | Bradi2g05230 | Bradi2g05230* |
| Â | BdCCA1 | Bradi3g16510 | Bradi3g16510* |