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Table 2 Relationship between genomic organization and DNA methylation of 5 S genes in the studied species

From: Expression of 5 S rRNA genes linked to 35 S rDNA in plants, their epigenetic modification and regulatory element divergence

Species

1Organization

Number of 5 S loci

1Position on chromosomes

2mC average

mC range

Artemisia absinthium

LS

2

(sub-)terminal

46%

34-62%

Tagetes patula

L

7

(sub-)terminal

33%

11-44%

Elachanthemum intricatum

SL

n.d.

n. d.

39%

31-45%

Helichrysum bracteatum

L

1

(sub-)terminal

34%

16-43%

Helianthus annuus

S

5

pericentromeric

63%

30-96%

Arabidopsis thaliana

S

3

pericentromeric

379%

336-95%

  1. 1 The genomic organization and chromosomal position of 5 S rDNA is taken from [1215, 38] and from the Plant rDNA database [39].
  2. 2This work.
  3. 3 Methylation levels of coding region were determined by bisulfite sequencing. Data for Arabidopsis genes are from [40]; slightly lower values were reported in [41].