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Table 6 Differentially expressed cell proliferation and growth related genes

From: Phosphate starvation of maize inhibits lateral root formation and alters gene expression in the lateral root primordium zone

Tigr_ID

Putative_Annotation

Ratios of transcript abundance

Ratios of transcript abundance

  

2 day

8 day

 

Histone

  

TM00043106

histone H1 - maize {Zea mays;}

0.8

0.48

TM00034952

histone H1-like protein HON101 {Zea mays;}

0.72

0.49

TM00041038

histone H1-like protein {Zea mays;}

0.96

0.49

TM00057303

histone H1-like protein {Zea mays;}

0.95

0.47

TM00041037

histone H1-like protein {Zea mays;}

0.79

0.36

TM00043108

histone H1 - maize {Zea mays;}

0.8

0.48

TM00056330

histone H1 - maize {Zea mays;}

0.78

0.36

TM00034974

histone H2A {Oryza sativa (japonica cultivar-group);}

0.78

0.44

TM00013559

Histone H2A. {Cicer arietinum;}

0.84

0.54

TM00036839

Histone H2A. {Zea mays;}

0.78

0.61

TM00040901

Histone H2A. {Zea mays;}

0.76

0.61

TM00013381

Histone H2A. {Zea mays;}

0.7

0.41

TM00057312

Putative histone H2A {Oryza sativa (japonica cultivar-group);}

0.63

0.53

TM00013393

Histone H2B. {Triticum aestivum;}

0.89

0.63

TM00013518

Histone H2B.1. {Zea mays;}

0.94

0.64

TM00040846

Histone H2B.2. {Zea mays;}

0.8

0.46

TM00035010

Histone H2B.4. {Zea mays;}

0.88

0.6

TM00042818

histone H3 (clone pH3c-1) – alfalfa {Medicago sativa;}

0.79

0.46

TM00042822

histone H3 {Oryza sativa (japonica cultivar-group);}

0.54

0.47

TM00057261

histone H3. {Helicoverpa zea;}

0.63

0.48

TM00023730

histone H4 - Arabidopsis thaliana {Arabidopsis thaliana;}

0.75

0.42

TM00043088

histone H4 - Arabidopsis thaliana {Arabidopsis thaliana;}

0.7

0.45

TM00037330

histone H4. {Arabidopsis thaliana;}

0.91

0.53

TM00013350

histone H4. {Arabidopsis thaliana;}

0.82

0.49

 

Ribosomal protein

  

TM00013705

60 S ribosomal protein L2 (L8) (Ribosomal protein TL2). {Lycopersicon esculentum;}

0.58

0.4

TM00035320

putative 60 S ribosomal protein L27a {Oryza sativa (japonica cultivar-group);}

0.68

0.62

TM00023944

putative 60 S ribosomal protein L30 {Oryza sativa (japonica cultivar-group);}

0.62

0.65

TM00023903

putative 60 S ribosomal protein L37 {Oryza sativa (japonica cultivar-group);}

0.64

0.99

TM00024198

putative 40 S ribosomal protein S8 {Zea mays;}

1.38

2.12

TM00040764

putative ribosomal protein S17 {Oryza sativa (japonica cultivar-group);}

1.3

0.61

TM00056490

ribosomal protein L30p family-like {Oryza sativa (japonica cultivar-group);}

1.09

0.6

TM00014222

ribosomal protein s6 RPS6-2 {Zea mays;}

0.83

0.56

TM00027666

putative ribosomal protein {Oryza sativa (japonica cultivar-group);}

0.87

0.54

TM00034882

Chloroplast 30 S ribosomal protein S7. {Zea mays;}

1.33

1.93

 

Protein synthesis

  

TM00042967

elongation factor {Saccharum officinarum;}

0.96

0.62

TM00039650

elongation factor 1 alpha {Saccharum hybrid cultivar CP65-357;}

0.81

0.56

TM00037693

elongation factor 1 alpha {Zea mays;}

0.53

0.42

TM00014515

Eukaryotic initiation factor 4A (eIF4A) (eIF-4A).

0.89

0.65

TM00056705

Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta)

0.6

0.76

TM00043994

putative serine protease {Oryza sativa (japonica cultivar-group);}

0.67

0.54

TM00026276

At1g64230/F22C12_17 {Arabidopsis thaliana;}

1.14

1.95

 

Protein degradation

  

TM00043210

putative ubiquinol-cytochrome C reductase complex ubiquinone-binding protein {Oryza sativa (japonica cultivar-group);}

1.11

1.56

TM00024337

putative ubiquinone/menaquinone biosynthesis methyltransferase {Arabidopsis thaliana;}

1.15

1.82

TM00043415

putative ubiquinone/menaquinone biosynthesis methyltransferase {Arabidopsis thaliana;}

1.36

1.99

TM00042923

polyubiquitin - maize {Zea mays;}

1.56

0.91

TM00027604

Probable U3 small nucleolar RNA-associated protein 11 {Oryza sativa;}

1.3

2.21

 

Cell growth and expansion

  

TM00024972

beta-expansin 7 {Zea mays;}

0.56

0.42

TM00024970

beta-expansin 7 {Zea mays;}

0.74

0.40

TM00033434

putative cellulase {Oryza sativa (japonica cultivar-group);}

-

0.41

TM00020258

cellulose synthase catalytic subunit 10 {Zea mays;}

1.38

0.39

TM00037072

cellulose synthase catalytic subunit 11 {Zea mays;}

1.38

0.5

  1. * Values means that the ratio of signal intense (LP treated/SPcontrol), and bold means that it meet the criterion of differentially expressed transcripts.
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BMC Plant Biology

ISSN: 1471-2229

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