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Table 1 The list of categories to which Arabidopsis sequences used as the queries were ascribed

From: The barley EST DNA Replication and Repair Database (bEST-DRRD) as a tool for the identification of the genes involved in DNA replication and repair

Process Pathway or Protein Complex No. of Arabidopsis genes No. of mRNA variants
DNA replication Initiation 6 6
Elongation 11 14
Maturation 5 7
ssDNA binding 9 12
Helicase loading factors 4 5
Replicative helicases 6 6
Origin recognition 8 9
PCNA loading complex 5 6
GINS complex 5 7
POLD clamp 2 2
DNA repair Damage response 8 15
Photoreactivation 6 9
Rad6 pathway 9 17
Non-Homologous End Joining 4 6
Mismatch repair 11 11
Base Excision Repair 17 24
BER-related genes 5 9
Nucleotide Excision Repair 27 37
Total 148 202