Trait | QTL name | Linkage group | Marker interval | LOD | Additive effecta) | Dominant effecta) | Phenotypic variation explained (%) |
---|---|---|---|---|---|---|---|
Flowering date (day) | qFD02.1 | LG02.1 | AHGS2736-AHGS1251 | 5.0 | 1.7 | −2.4 | 19.5 |
Angle of branch (1: erect to 5: spread-out) | qAB05.1 | LG05.1 | AHGS2534-AHGS2622 | 5.7 | 0.5 | −0.9 | 11.9 |
 | qAB07.2 | LG07.2 | AHGS1215-AhTE0615 | 4.6 | −0.6 | 0.2 | 23.2 |
Length of main stem (cm) | qLMS06.2 | LG06.2 | AhTE0589-Ah1TC3H7 | 7.9 | 2.8 | 7.2 | 4.8 |
 | qLMS04.2 | LG04.2 | AHGS2155-AHGS3725 | 6.8 | 4.5 | 2.3 | 19.2 |
 | qLMS05.2 | LG05.2 | AHGS2020-AHGS2450 | 4.6 | −4.4 | 2.0 | 15.7 |
Length of the longest branch (cm) | qLLB06.2 | LG06.2 | AhTE0697-Ah1TC3H7 | 5.7 | 7.6 | 9.9 | 21.1 |
 | qLLB01.2 | LG01.2 | AHGS1813b-AhTE1016 | 4.7 | 4.9 | −7.0 | 14.2 |
Number of branches (branch) | qNB06.2 | LG06.2 | AhTE0967-AhTE0074 | 5.1 | 5.2 | 3.8 | 15.6 |
Weight of plant (g) | qWP06.2 | LG06.2 | AhTE0697-Ah1TC3H7 | 5.4 | 7.8 | 12.9 | 11.8 |
Weight of mature pod per a plant (g) | qWMP09.2 | LG09.2 | AHGS0422-AHGS2635 | 7.2 | 5.4 | 2.2 | 28.1 |
Length of pod (mm) | qPL05.1 | LG05.1 | AhTE0601-AHGS1413 | 6.7 | −2.4 | 2.2 | 28.2 |
 | qPL09.2 | LG09.2 | AHS1684-AhTE0707 | 5.4 | −1.5 | −1.6 | 8.4 |
 | qPL06.2 | LG06.2 | AhTE0745-AhTE0826 | 4.9 | −2.1 | 1.1 | 20.5 |
Thickness of pod (mm) | qPT07.1 | LG07.1 | AHGS1803a-AhTE0025 | 11.9 | 1.0 | 0.4 | 21.7 |
Width of pod (mm) | qPW07.1 | LG07.1 | AhTE0025-pPGPSeq2E6b | 11.4 | 0.6 | 0.4 | 15.2 |
 | qPW08.2 | LG08.2 | AHGS1286-AHGS2249 | 9.5 | −0.7 | 0.4 | 25.5 |
Constriction of pod (1: deep to 5: shallow) | qCP09.2 | LG09.2 | AHGS0362-AhTE0726 | 8.1 | −0.6 | −0.5 | 18.1 |
 | qCP09.1 | LG09.1 | AHGS1673-AhTE0222 | 6.2 | 0.3 | 0.6 | 6.9 |
Shape of tip of pods (1: round to 5: sharp) | qSTP03.2 | LG03.2 | AhTE0570-AHGS1744 | 5.9 | −0.3 | 0.7 | 9.9 |
Weight of a seed (g) | qWS08.2 | LG08.2 | AhTE0846-AhTE0974 | 4.9 | −0.1 | 0.1 | 19.1 |
Number of seeds per a plant (grain) | qNS08.2 | LG08.2 | AHGS1286-AHGS2249 | 5.2 | 3.0 | 28.3 | 6.8 |
Color of seed coat (2: orange–yellow to 5: brown–red) | qCSC03.2 | LG03.2 | PM3a-AHGS1792 | 67.4 | 0.6 | 1.4 | 9.7 |