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Table 1 The family of Deg/HtrA proteases in Arabidopsis thaliana

From: The family of Deg/HtrA proteases in plants

Gene modela Protein nameb UniProtKB acc. no.c aa domain arrangementd Orthologs in other plants (this study) Protein name used in this study
At3g27925 DEG 1 O22609 439 PD-PDZ Cre02.g088400 Cre14.g630550 Cre12.g498500 Os05g0568900 Pp1s160_79V6 Pp1s198_100V6 POPTR_0001s34960 AtDeg1
At2g47940 DEG 2 O82261 607 PD-PDZ-PDZ Cre19.g752200 Os05g0147500 Pp1s8_140V6 POPTR_0014s12970 POPTR_0020s00220 AtDeg2
At1g65630 DEG 3 Q9SHZ1 559 PD-PDZ-PDZ Deg 10 Subgroup AtDeg3
At1g65640 DEG 4 Q9SHZ0 518 PD-PDZ-PDZ Deg10 Subgroup AtDeg4
At4g18370 DEG 5 Q9SEL7 323 PD Cre02.g110600 Os12g0616600 Pp1s63_95V6 POPTR_0011s02330 AtDeg5
At1g51150 DEG 6 Q9C691 219 PDia n.a. AtDeg6
At3g03380 DEG 7 Q8RY22 1097 PD-PDZ-PDZ- PDia-PDZ-PDZ Cre03.g180650 Os02g0712000 Pp1s237_5V6 Pp1s21_327V6 POPTR_0017s03050 POPTR_0004s08740 POPTR_0004s08720 AtDeg7
At5g39830 DEG 8 Q9LU10 448 PD-PDZ Cre01.g028350 Os04g0459900 Pp1s31_50V6 POPTR_0004s13440 AtDeg8
At5g40200 DEG9 Q9FL12 592 PD-PDZ-PDZ Cre19.g752200 Os02g0742500 Os06g0234100 Pp1s176_87V6 Pp1s1_203V6 POPTR_0015s08440 POPTR_0004s13440 AtDeg9
At5g36950 DEG10 Q9FIV6 586 PD-PDZ-PDZ Cre14.g617600 Cre01.g013300 Os05g0417100 Pp1s55_7V5.1 POPTR_0008s07940 AtDeg10
At3g16540 DEG11 Q9LK71 555 PD-PDZ-PDZ Deg10 Subgroup AtDeg11
At3g16550 DEG12 Q9LK70 499 PD-PDZ-PDZ Deg10 Subgroup AtDeg12
At5g40560 DEG13 Q9FM41 486 PD-PDZ-PDZ Deg10 Subgroup AtDeg13
At5g27660 DEG14 Q3E6S8 429 PD-PDZ Os11g0246600 Pp1s180_15V6 POPTR_0013s01900 AtDeg14
At1g28320 DEG15 Q8VZD4 709 NT-PD Cre12.g548200 Os05g0497700 Pp1s196_28V6 POPTR_0004s04650 POPTR_0011s05510 AtDeg15
At5g54745 DEG16 Q3E8B4 198 PDia n.a. AtDeg16
  1. a According to TAIR database. b According to [14]. c If more than one protein entry was present, the different versions were analyzed by the HHPred platform (, and the one with intact protease domain and (if present) PDZ domain(s) was considered here. Sequences used in this study are supplied as Supplementary material (Additional file 1). d According to the HHPred platform. Abbreviations: aa, amino acids; n.a., not available; NT, elongated N-terminus; PD, potentially active protease domain; PDia, inactive protease domain (i.e. at least one residue of the catalytic triad is mutated or missing); PDZ, PDZ domain.