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Table 6 Specific alleles at each microsatellite locus within geographic region pairs

From: Loss of genetic diversity as a signature of apricot domestication and diffusion into the Mediterranean Basin

 

Total alleles1

Shared alleles2

Region A vs.B

Region A vs.C

Region B vs.C

   

Total allelesa

Specific allelesb

Total allelesa

Specific allelesb

Total allelesa

Specific allelesb

AMPA109

8

4

7

209 (0.022)c

6

 

7

 

CPPCT034

9

7

8

 

9

193 (0.005)c, 207 (0.022)c

8

 

UDP96-018

6

2

5

263 (0.039)c

5

 

4

 

AMPA116

11

7

10

127 (0.162)c

11

 

8

 

BPPCT001

5

2

4

 

5

 

3

 

BPPCT004

12

10

12

176 (0.022)c

12

209 (0.022)c

10

201 (0.012)c

BPPCT030

8

6

7

142 (0.056)c

7

150 (0.012)c

8

 

AMPA101

8

5

7

206 (0.031)c

6

 

7

 

AMPA119

8

5

8

114 (0.007)c

8

104 (0.014)c

5

 

BPPCT040

10

4

8

138 (0.019)c, 142 (0.014)c

9

 

7

 

UDP97-402

10

7

10

 

8

118 (0.007)c, 124 (0.007)c, 144 (0.005)c

9

 

AMPA105

12

6

10

198 (0.072)c

10

 

10

 

BPPCT017

10

5

9

 

9

199 (0.010)c, 207 (0.014)c

7

 

BPPCT038

13

9

11

 

12

 

12

135 (0.005)c

AMPA100

9

7

9

 

8

210 (0.029)c

8

 

BPPCT008

12

9

10

113 (0.014)c, 119 (0.012)c

11

125 (0.060)c, 129 (0.005)c

12

 

BPPCT025

9

5

8

 

8

 

7

 

CPPCT030

16

9

12

165 (0.005)c

16

169 (0.022)c, 173 (0.012)c

13

 

Ma014a

6

3

5

 

6

136 (0.007)c

4

 

Ma040a

11

5

7

 

10

213 (0.029)c

10

 

UDP98-412

11

8

10

107 (0.005)c, 113 (0.007)c

11

93 (0.019)c

9

 

CPPCT022

15

11

14

234 (0.010)c, 246 (0.022)c, 262 (0.012)c

14

232 (0.007)c, 254 (0.022)c

13

 

CPPCT033

9

5

8

139 (0.056)c

8

141 (0.019)c, 161 (0.036)c

7

 

CPPCT006

11

7

10

 

10

197 (0.155)c

9

 

UDP98-409

18

13

15

 

17

122 (0.056)c, 130 (0.005)c, 150 (0.007)c

17

154 (0.089)c, 158 (0.005)c

Total

257

161

215

19 (0.074)d

241

26 (0.097)d

196

4 (0.015)d

  1. 1 total allele observed at each locus.
  2. 2 alleles shared at least by two of the three geographic regions.
  3. a alleles observed in each region pairwise (regions A vs. B, A vs. C and B vs. C).
  4. b specific alleles observed in each region pairwise (regions A vs. B, A vs. C and B vs. C).
  5. c frequency of alleles based on the total number of alleles observed at the 25 SSR loci in the 207 apricot accessions studied.
  6. d frequency of specific alleles based on the total number of alleles detected at the 25 loci.