Table 1 genes with putative functions in transcriptional regulation or signalling whose expression changed by > 2-fold in roots of Arabidopsis seedlings expressing Spcdc25 compared to WT
Ratio Spcdc25/WT | t-test P-value | ATG code | Putative function |
|---|---|---|---|
2.6 | 0.009 | At5g61590 | member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family |
2.6 | 0.002 | At1g12010 | 1-aminocyclopropane-1-carboxylate oxidase putative/acc oxidase putative |
2.3 | 0.001 | At5g59780 | regulation of transcription, response to ethylene gibberellin, jasmonic acid, and salicylic acid stimuli |
2.2 | 0.001 | At5g20030 | RNA binding protein |
2.1 | 0.019 | At5g54930 | AT hook motif-containing protein; functions in: DNA binding |
2.1 | 0.036 | At1g48260 | SNF1-related kinase (SnRK) member of the CBL-interacting protein kinases (CIPK17). |
2.1 | 0.045 | At5g53450 | OBP3-responsive gene 1 (ORG1); functions in: protein kinase activity, kinase activity, |
2.0 | 0.040 | At1g69220 | serine/threonine kinase (SIK1) similar to yeast gene PAK1 involved in cytokinesis, actin polarization. |
2.0 | 0.042 | At1g08320 | bZIP family transcription factor |
2.0 | 0.004 | At3g56970 | OBP3-RESPONSIVE GENE 2, member of the basic helix-loop-helix transcription factor family |
0.2 | 0.000 | At2g25490 | Negative regulation of ethylene signalling F-box protein involved in the proteolysis of EIN3 |
0.3 | 0.002 | At5g42020 | Luminal binding protein (BiP2) involved proliferation of endosperm nuclei, response to stress |
0.3 | 0.029 | At5g14580 | polyribonucleotide nucleotidyltransferase, involved in RNA processing, stability |
0.4 | 0.034 | At4g24190 | SHD: ER-resident HSP90-like protein and is involved in regulation of meristem size and organization |
0.4 | 0.020 | At1g27320 | AHK3: histidine kinase, a cytokinin receptor. |
0.5 | 0.001 | At1g20823 | zinc finger (C3HC4-type RING finger) family protein, response to chitin, a plant-defense elicitor. |
0.5 | 0.031 | At2g27050 | transcription factor, ethylene-insensitive3-like1 (EIL1), response to ethylene stimulus |
0.5 | 0.044 | At2g02170 | remorin family protein; functions in: DNA binding, high expression in SAM |
0.5 | 0.009 | At1g49760 | polyadenylate-binding protein, putative/PABP, putative, similar to poly(A)-binding protein, |
0.5 | 0.019 | At2g01150 | RING-H2 finger protein ubiquitin-protein ligase activity |