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Table 5 Significant ( P < 0.05) marker-phenotype associations for genes CRY1-b1 and GI in sorghum

From: Association analysis of photoperiodic flowering time genes in west and central African sorghum [Sorghum bicolor (L.) Moench]

Gene

Polymorphism

Change of allele state

Type of change

AE (days)

SE (AE)

P

CRY1-b1

SNP722

T_A

aa

-4.20

1.51

0.006

GI

SNP888

T_C

aa

+7.98

2.90

0.008

GI

indel904

0_1

fs

+7.25

2.64

0.008

GI

SNP909

C_G

aa

+7.38

2.07

0.001

  1. Note: For change of allele state, 0 denotes the absence and 1 denotes the presence of an indel.
  2. Type of change caused by polymorphism as aa: amino acid substitution or fs: frame-shift mutation, AE: allele effect, SE: standard error of the allelic effect, P: P-value of allelic effect