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Table 1 Summary of high-throughput sequencing of tobacco small RNAs from root and leaf

From: Identification of wounding and topping responsive small RNAs in tobacco (Nicotiana tabacum)

Category

Root

Leaf

 

Control

Topping

Wounding

Wounding

Total

    

   Raw reads

3,074,948

5,186,473

5,510,747

4,722,862

   Unique raw reads

1,018,809

1,959,287

3,083,036

2,178,969

Mapped to GSS#

    

   Reads

1,277,575

2,632,084

2,700,532

2,469,534

Specific in each library

206,310

477,279

803,960

491,809

Conserved in all libraries

782,079

1,667,977

1,085,172

1,312,822

   Unique

252,425

542,516

965,547

687,949

Specific in each libraries

148,981

385,469

702,522

442,337

Conserved in all libraries

25,780

25,780

25,780

25,780

   Singleton

202,567

417,905

761,185

534,409

Mapped to EST#

    

   Reads

764,235

1,293,204

1,218,970

1,528,346

Specific in each libraries

43,758

99,553

137,509

107,459

Conserved in all libraries

563,565

985,513

811,452

1,165,580

   Unique

72,750

129,710

186,601

149,454

Specific in each libraries

32,875

77,511

116,666

84,638

Conserved in all libraries

14,001

14,001

14,001

14,001

   Singleton

48,486

88,566

131,515

102,406

  1. #Only 19-25-nt reads were counted