Table 4 Cell wall-related genes from ripe papaya and A. thaliana hypocotyl
From: Analysis of ripening-related gene expression in papaya using an Arabidopsis-based microarray
Gene Description | TAIR annotation | Log2 Fold† | Probe set ID | |
|---|---|---|---|---|
Papaya | A. thaliana†† | |||
Pectate lyase (PL) | AT1G09910 | −1.01 | −0.06 | 264658_at |
Expansin A15 (EXPA15) | AT2G03090 | −0.42 | −0.01 | 266770_at |
Xyloglucan endotransglycosylase (ext/EXGT-A1) (XTH) | AT2G06850 | −0.86 | −0.65 | 266215_at |
UDP-glucuronate 4-epimerase (GAE6) | AT3G23820 | −1.55 | −0.52 | 256865_at |
Cellulose synthase-like 12 (CSL12) | AT4G07960 | 0.34 | −0.07 | 255175_at |
Pectinesterase (pectin methyl esterase) (PME2) | AT4G12420 | −0.42 | −0.27 | 254815_at |
Pectate lyase family 1 (PL) | AT4G24780 | −1.23 | 0.67 | 254119_at |
Cellulose synthase-like 9 (CSL9) | AT5G03760 | −0.6 | −0.64 | 250892_at |
COBRA-like gene 4 (COBL4) | AT5G15630 | 0.66 | −0.47 | 246512_at |
Pectinesterase (pectin methylesterase) (PME1) | AT5G48450 | 0.5 (−3.42)* | −0.36 | 248704_at |
Arabinogalactan protein 22 (AGP22) | AT5G53250 | 1.13 | 0.96 | 248252_at |
GDP-mannose 4,6-dehydratase 1 (GMD1) | AT5G66280 | −0.42 | −0.24 | 247094_at |