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Table 1 List of pineapple ESTs from KEGG pathway maps with contig ID numbers ( http://www.pgel.com.au ), Arabidopsis ID tag, normalized expression value and annotated gene description

From: Microarray analysis of gene expression profiles in ripening pineapple fruits

Schematic Name

Arabidopsis homologue CloneID

Normalized Expression Levels

Description

KEGG

ID

Glycolysis - KEGG PATHWAY

 

contig 763

At3g04120

4.1

Glyceraldehyde 3-phosphate dehydrogenase, cytosolic

Ac763

contig 251

At4g33070

3.4

Pyruvate decarboxylase 1

Ac251

contig 30

At2g36530

2.3

Enolase

Ac30

contig 1110

At1g77120

2.1

Alcohol dehydrogenase

Ac1110

contig 3191

At3g55440

2.1

Triose-phosphate isomerase

Ac3191

contig 441

At1g09780

1.6

Phosphoglycerate mutase

Ac441

Cysteine and Methionine Metabolism

 

contig 3189

At4g14880

2.3

Cysteine synthase

Ac3189

contig 117

At4g14710

1.7

ATARD2 acireductone dioxygenase2

Ac117

contig 113

At3g25570

1.6

S-adenosylmethionine decarboxylase

Ac113

contig 1009

At5g11520

1.5

Aspartate aminotransferase

Ac1009

contig 3350

At4g19710

1.5

Bifunctional aspartokinase/homoserine dehydrogenase

Ac3350

Ubiquitin-Mediated Proteolysis - KEGG Pathway

 

contig 1299

At2g02760

3.1

Ubiquitin conjugating protein

UBE2A

contig 154

At1g16890

1.6

Ubiquitin carrier protein E2 36

UBE2N

contig 861

At5g22920

1.6

Putative PGPD14 protein (pollen germination related protein)

PIRH2

contig 1793

At5g42190

1.5

SKP1-like protein 1B

SKP1

contig 1433

At1g64230

−2.0

Ubiquitin carrier protein E2 28

UBE2D_E

contig 153

At3g57870

−2.2

Ubiquitin carrier protein

UBE2I