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Table 3 List of primers used

From: 'Le Rouge et le Noir': A decline in flavone formation correlates with the rare color of black dahlia (Dahlia variabilis hort.) flowers

Gene

Primer

 

Sequence 5’→3’

Fragment size (bp)

 

oligo(−dT) anchor primer

 

GACCACGCGTATCGATGTCGAC(T)16V

 

FNS II

FNS1

F

CCCAACACCATGAATACACTCC

 
 

FNS4

R

TCACCACTGAGAGTTCTCTCATGG

 

FNS II

FNSIIRub-ex

F

CCCAACACCATGAATACA C

 
  

R

GAAGCGAAGGTAAACACA C

 

FNS II

Dah.FNSII.lang

F

CAACACCATGAATACACTCCTAGTACTCC

 
  

R

CTTAGACTGAAGTAAACATCGAATGTGGAGAG

 

FNS II

qPCR

F

GCATCCAGAATCTCGGCCATT

 
 

qPCR

R

TCGTTGTCACTTCTCGCACTAG

 

Actin

qPCR

F

GGAAAAGATTTGGCATCACACTTTC

103

 

qPCR

R

AGCCTTAGGATTTAAAGGTGCCTCA

 

GAPDH

qPCR

F

AGGCTGTTGGTAAGGTGTTGC

141

 

qPCR

R

GCAGCCTTGATCTGCTCATAAG

 

CHS1

qPCR

F

GCGCGTATATGGCACCTTCG

198

 

qPCR

R

GGCCGAGGAGCTTGGTGAGT

 

CHS2

qPCR

F

ACGTTTCGTGGACCGACGGAT

185

 

qPCR

R

CAGCCCCACCTCCCTCAAG

 

CHI

qPCR

F

ACTTCCCTCCCGGCTCCTCT

182

 

qPCR

R

TTGTTTGGCTGCTGGGGAAACAC

 

FHT

qPCR

F

CCACAGCCCGACCTGACACT

202

 

qPCR

R

CGTTCTTGAACCGCCCATTG

 

DFR

qPCR

F

GCCAAAGCCAAGACGGTCAA

192

 

qPCR

R

CGTTGCCTTCCATGCTGCTT

 

ANS

qPCR

F

GCTGCAGGCGAGGGTTTCTT

119

 

qPCR

R

GTCGACGGCCAAATGGTGAG

 

F3’H

qPCR

F

AACTGCCTTGCTATTGTACGTACTG

147

 

qPCR

R

TTTTCCGCCAGGGCTGCC

 

MaT

qPCR

F

TTGGAATATGCCGACCGATG

112

 

qPCR

R

CCTTTCCCCACCCAAAATCA

 

Delila

qPCR

F

ATCTCACAAACGCCGAGTGGTATT

158

 

qPCR

R

TGCTAGAAGAGAGCGGCAGAAGA

 

IVS

qPCR

F

CGTCGTCGAGAGAAGCTAAACGA

151

 

qPCR

R

GACATCGTGCTTCCAAATCCTGAA

 

MYB1

qPCR

F

TTGAGGAAAGGTTCATGGTCAGC

145

 

qPCR

R

AATTTGTCCATCGTAGCCTGCAAC

 

MYB2

qPCR

F

ACCCTCCTCCAACCACTCATCAT

160

 

qPCR

R

TGAGGTGGGCTCATTCTCAACTC

 

R3MYB

qPCR

F

ATGGCCGTGAGAAGGAAATTGATG

153

 

qPCR

R

CAAGGAGGTCCAACATGACAAC

 

WDR1

qPCR

F

CGGTTGCGGAACTAGAGAGAC

155

 

qPCR

R

TGACATCGGGTCAATCCCATTAGG

 

WDR2

qPCR

F

CAGAGGCATCAGTCGAGTGTGA

149

 

qPCR

R

GCCAATATCGGATCCAATCCACCT

 
  1. Abbrev.: F: forward, R: reverse.