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Table 2 Statistics of the assembly (unigene number and percentage) with the Trinity method

From: Deep-sequencing transcriptome analysis of chilling tolerance mechanisms of a subnival alpine plant, Chorispora bungeana

 

Control

Cold-stressed

Combined

200-500nt

21,064 (45.52%)

26,284 (51.97%)

25,233 (45.99%)

500-1000nt

11,421 (24.68%)

12,215 (24.15%)

12,746 (23.23%)

1000-1500nt

6,190 (13.38%)

5,811 (11.49%)

7,290 (13.29%)

1500-2000nt

3,651 (7.89%)

3,193 (6.31%)

4,458 (8.12%)

> = 2000nt

3,946 (8.53%)

3,071 (6.07%)

5,143 (9.37%)

N50

1,335

1,136

1,401

Mean

868

754

888

All Unigene

46,272

50,574

54,870

Length of all Unigene (nt)

40,180,147

38,132,636

48,708,039