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Figure 6 | BMC Plant Biology

Figure 6

From: Co-expression analysis identifies putative targets for CBP60g and SARD1 regulation

Figure 6

The SID2 regulon is enriched with known cis-elements and novel motifs. POBO analysis of motif distribution in 1500 bp promoters from experiment #2 cluster 2. 1000 pseudoclusters of 30 genes were generated both from within cluster 2 and the genome background; jagged lines show the motif frequencies from which a fitted curve was derived. (A-C) CCTNNNNNNNTCC motifs are significantly over-represented with a p-value < 0.0001 though CCT and TCC motifs are significantly under-represented in the cluster. (D-E) Different versions of the W-box consensus sequence binding site for WRKY transcription factors and (F) the defined WRKY28 binding site are significantly over-represented in cluster 2.

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