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Table 1 Amino acid polymorphisms in BoFRIa from cultivated genotypes of Brassica oleracea

From: Functional alleles of the flowering time regulator FRIGIDA in the Brassica oleraceagenome

Line

Accession name

Crop type

Crop group

Ref

origin

cult/landrace/DH

32

36-42

97

102

103

106

107

108

109

110-112

118

119

125

172

BoFRIaAllele

SIR5a

Siria DH line 5a

Cauliflower

Cauliflower

E03

N/A

DH

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU002838

ALGROMAJO NO 2

Cauliflower

Cauliflower

E05

NL

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU004832

TOSCANO

Autumn cauliflower

Cauliflower

D10

ITA

cultivar

T

 

V

V

S

P

K

D

A

 

V

C

E

F

2

HRIGRU005458

DI JESI

Autumn cauliflower

Cauliflower

E02

ITA

cultivar

T

 

V

V

S

P

K

D

A

 

V

C

E

F

2

HRIGRU006254

TASMAN

Autumn cauliflower

Cauliflower

D11

AUS

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU004239

CANBERRA

Autumn cauliflower

Cauliflower

D08

AUS

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU008558

GIGANTE DI NAPOLI NATALINO *

Autumn cauliflower

Cauliflower

D12

ITA

N/A

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU006797

SOFIA

Autumn cauliflower

Cauliflower

E01

SP

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU004814

BIANCO NAPOLETANE NATALINO

Summer cauliflower

Cauliflower

E07

ITA

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU004991

ALL THE YEAR ROUND

Summer cauliflower

Cauliflower

E08

UK

N/A

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU004847

VERDE DI MACERATA

Green caulilfower

Cauliflower

F05

ITA

N/A

T

 

V

V

S

P

K

D

A

 

V

C

E

F

2

HRIGRU004850

DI ALBENGA

Green caulilfower

Cauliflower

F06

ITA

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU004861

ROMANESCO NATALINO

Romanesco cauliflower

Cauliflower

F07

ITA

cultivar

T

 

V

A

P

P

K

D

A

 

V

C

E

V

3

HRIGRU002891

ST MALO HALF HATIF

Winter cauliflower

Cauliflower

E11

FRA

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU004492

WINTER ROSCOFF

Winter cauliflower

Cauliflower

E12

IRE

landrace

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU006230

LATE QUEEN

Winter cauliflower

Cauliflower

F02

IND

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

ROS152b

Roscoff type F1 DJ1356 DH line 152b

Roscoff winter cauliflower

Cauliflower

E06

N/A

DH

T

 

V

V

S

P

K

D

A

 

V

C

E

F

2

Cor12b

Corvette DH line 12b

broccoli

Broccoli

A07

N/A

DH

T

 

V

V

S

P

K

D

A

 

V

C

E

F

2

CAL 18b

DH line Royal Sluis F1 RS71343 (DJ6546)

broccoli

Broccoli

A11

N/A

DH

T

 

V

V

S

P

K

D

A

 

V

C

E

F

2

HRIGRU002398

PICOLINI DI PALERMO

broccoli

Broccoli

B01

ITA

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU011802

MUGNULI

broccoli?

Broccoli

B02

ITA

landrace

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU005276

CIMA VIOLETTA NATALINO

Purple head broccoli

Broccoli

B08

ITA

cultivar

T

 

V

V

S

P

K

D

A

 

V

C

E

F

2

HRIGRU003543

PURPLE SPROUTING LATE IMPROVED

Sprouting broccoli

Broccoli

B09

UK

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU005416

CAVOLO CAVOLINA RIZZA

Feather leaf broccoli

Broccoli

B06

ITA

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU004705

RAMOSO CALABRESE PRECOCE

Calabrese

Broccoli

B03

ITA

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU005425

CAVOLO BROCCOLO NATALINO

Calabrese

Broccoli

B05

ITA

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

BOH 85c

Bohmerwaldkohl DH line 85c

Cabbage

Cabbage

C07

N/A

DH

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU005652

SHETLAND CABBAGE

Cabbage

Cabbage

C11

UK

N/A

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU007833

LARGE BLOOD RED

Cabbage

Cabbage

D01

IND

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HA 84a

Hawke DH line Ha84a

Cabbage

Cabbage

C08

N/A

DH

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU004773

CAVOLO VERZA SAN GIOVANNI

Savoy cabbage

Cabbage

D05

ITA

cultivar

T

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

5

HRIGRU011490

COUVE REPOLHO BACALAN

White cabbage

Cabbage

D07

PORT

landrace

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU004771

CAVOLO CAPPUCCIO MEDIO NAPOLETANE

Summer cababge

Cabbage

D06

ITA

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU002574

CATTLE (EARLY DRUMHEAD)

Fodder cabbage

Cabbage

D02

UK

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

AC582

DH ex. Nym

Brussels sprout

Brussels sprout

B11

N/A

DH

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU000342

EVESHAM GIANT

Brussels sprout

Brussels sprout

B12

UK

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU000605

WILHELMSBURGER

Brussels sprout

Brussels sprout

C01

DEN

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU002227

SANDA ROEM VAN CASTRICUM

Brussels sprout

Brussels sprout

C02

UK

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU002787

GROENENBOOM LATE SELECTION

Brussels sprout

Brussels sprout

C03

NL

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU005086

OLD BEDFORDSHIRE STOCK

Brussels sprout

Brussels sprout

C04

UK

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU006212

CAVOLO DI BRUXELLES MEZZO NANO

Brussels sprout

Brussels sprout

C05

ITA

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU008226

LOCAL SELECTION

Brussels sprout

Brussels sprout

C06

BHUTAN

landrace

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

CGN14111

Butzo

Kale

Kale

G03

N/A

N/A

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU006226

GIANT JERSEY KALE

Kale

Kale

G04

UK

cultivar

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU009846

RED ON GREEN

Ornamental kale

Kale

G08

JPN

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU003598

WESTLAND WINTER VERDURA

Borecole kale

Kale

F10

UK

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU006210

CAVOLO NERO DI TOSCANA O *

Fodder black kale

Kale

F12

ITA

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU011183

PURPLE VIENNA

Kohl rabi

Kohl rabi

G10

USA

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU008267

WHITE VIENNA

Kohl rabi

Kohl rabi

G11

IS

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU005443

CAVOLO FORTE

Purple kohl rabi

Kohl rabi

G12

ITA

cultivar

S

DEL

I

A

S

S

P

N

K

DEL

A

C

E

F

6

HRIGRU007543

CHINESE KALE

Chinese kale

Alboglabra

A02

CHINA

landrace

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

Senna (GK95186)

Senna

Chinese white kale

Alboglabra

A05

N/A

DH

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU009490

COUVE CORTE

Tronchuda cabbage

Tronchuda cabbage

H02

PORT

landrace

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

HRIGRU009574

COUVE PENCA DE GONDOMAR

Tronchuda cabbage

Tronchuda cabbage

H05

PORT

landrace

T

 

V

V

S

P

K

D

A

 

A

C

Q

F

1

HRIGRU007796

 

Wild cabbage

Wild cabbage

H08

UK

N/A

S

DEL

I

A

S

S

P

N

K

DEL

A

Y

E

F

4

  1. Details of amino acid polymorphisms in the 55 B. oleracea genotypes from the BolDFS genotypes [60] for the first 650 bp of BoFRIa. The number of genotypes in a BoFRIa allele type within each vegetable type is also listed