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Table 5 Genes encoding translation factor and ribosomal protein were down-regulated, whereas ribosomal RNA transcripts are up-regulated in transgenic AC2 expressing tobacco leaves

From: Expression of geminiviral AC2 RNA silencing suppressor changes sugar and jasmonate responsive gene expression in transgenic tobacco plants

EST/mRNA Fold Gene description EST/mRNA Fold Gene description
Translation factors Ribosomal protein (60S)
TA22209_4097 0.43 Nicotiana tabacum Eukaryotic translation initiation factor 3 TA14313_4097 0.45 Nicotiana tabacum L19 ribosomal protein L19
EB437355 0.35 Ricinus communis eukaryotic translation initiation factor 3 L27089 0.42 Petunia x hybrida ribosomal protein L15
DW000860 0.32 Glycine max Elongation factor G, chloroplast precursor TA11947_4097 0.40 Nicotiana tabacum|Rep: Ribosomal protein L11-like
FG642632 0.25 Arabidopsis thaliana elongation factor P (EF-P) EH622574 0.45 Nicotiana tabacum ribosomal protein L11
FG198791 0.31 Arabidopsis thaliana SCO1 translation elongation factor EH619918 0.47 Nicotiana tabacum|Rep: Ribosomal protein L11-like
FG198791 0.35 Ricinus communis translation elongation factor G, TA13020_4097 0.50 Ribosomal protein S11
EB439252 0.48 Solanum tuberosum ribosome-associated protein p40-like CV015940 0.42 Ricinus communis ribosomal protein L5
TA16219_4097 0.41 Medicago truncatula Ribosome-binding factor A FG152141 0.46 Nicotiana tabacum ribosomal protein L3A (RPL3A)
AM746200 0.40 Nicotiana tabacum glutamyl tRNA Reductase Ribosomal protein (40S)
BP135506 0.48 Ricinus communis lysyl-tRNA synthetase FG640934 0.27 Zea mays 40S ribosomal protein S21
Ribosomal protein (60S) EB678225 0.34 Solanum tuberosum 40S ribosomal protein S15
EH622574 0.29 Solanum tuberosum 60S ribosomal protein L21- like protein TA12310_4097 0.45 Solanum tuberosum 40S ribosomal protein S19-like
DV161940 0.35 Lupinus luteus 60S ribosomal protein L30 DW001420 0.45 Arabidopsis thaliana 40S ribosomal protein S24
CV016994 0.36 Nicotiana tabacum (TSC40-3) 60S ribosomal protein L34 TA18231_4097 0.46 Solanum tuberosum|Rep: Putative 40S ribosomal protein S8
TA14313_4097 0.38 Solanum 60S ribosomal protein L38 DV159788 0.46 Capsicum annuum 40S ribosomal protein S2
CV021750 0.43 Arabidopsis thaliana 60S ribosomal protein L22-2 EB678225 0.47 Solanum tuberosum clone 40S ribosomal protein S15
DW000198 0.43 N.tabacum RL2 60S ribosomal protein L2 TA12310_4097 0.48 Solanum tuberosum 40S ribosomal protein S19
TA12097_4097 0.44 Solanum lycopersicum 60S ribosomal protein L8 EH615086 0.48 Ricinus communis 40S ribosomal protein S8
CV018461 0.45 Nicotiana tabacum (TSC40-4) 60S ribosomal protein L34 mRNA FG142425 0.49 Ricinus communis 40S ribosomal protein S2
TA15366_4097 0.47 Solanum lycopersicum Similar to 60S ribosomal protein L35 FG642795 0.49 Arabidopsis thaliana 40S ribosomal protein S20 (RPS20B)
TA13593_4097 0.48 Arabidopsis thaliana 60S ribosomal protein L41 TA12892_4097 0.49 Solanum demissum 40S ribosomal protein S9
TA12097_4097 0.48 Solanum lycopersicum 60S ribosomal protein L8 TA13535_4097 0.49 Solanum tuberosum 40S ribosomal protein S4
TA14313_4097 0.48 Solanum|Rep: 60S ribosomal protein L38 Ribosomal RNA
L27089 0.48 Nicotiana tabacum (TSC40-3) 60S ribosomal protein TA19036_4097 9.62 Nicotiana tabacum 18S ribosomal RNA gene, nuclear
TA11947_4097 0.50 Capsicum annuum 60S ribosomal protein L19 TA12851_4097 6.62 Coffea arabica 26S ribosomal RNA gene, mitochondrial
EH622574 0.50 Solanum tuberosum 60S ribosomal protein L21- like protein TA17274_4097 4.28 Nicotiana sylvestris 5.8S rRNA gene
EH619918 0.47 Solanum tuberosum clone 106F12 ribosomal protein L38 TA19143_4097 3.78 Nicotiana tabacum 18S ribosomal RNA gene, nuclear
TA13020_4097 0.50 Glycine max Ribosomal protein L37 TA16088_4097 3.17 Olpidium brassicae 28S ribosomal RNA gene, nuclear 25S rRNA
CV015940 0.47 Nicotiana glutinosa ribosomal protein L31 TA11649_4097 0.33 Nicotiana tabacum chloroplast 16S 23S ribosomal RNA gene
FG152141 0.48 Solanum tuberosum ribosomal protein L27a-like    
DV157967 0.47 Nicotiana tabacum ribosomal protein L25    
TA12097_4097 0.34 Medicago truncatula Ribosomal protein L24E    
  1. Fold change is indicated as a ratio of AC2/WT calculated from normalized median intensity values (n = 3).