Figure 3

Haplotype analyses and fine-mapping of qd5-1 in the early generation in POP-2 (A) Map position of qd5-1 in three environments. (B) Summary of genotype and phenotypic effects in the genomic regions that contains qd5-1. (C, D) The detailed haplotype analyses between types 1 and 3 (C) or types 2 and 3 (D) as in Figure 3B. The bars indicate the missing data. (E) The distribution of BACs (black lines) and candidate genes (red line indicates VTE4) in the genomic regions after fine mapping. The black lines mean each BAC and the red line represent the BAC that the candidate gene VTE4 located, all the BACs information is from web site (http://www.maizesequence.org/%20B73_version%205a.60),.