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Table 1 The list of analyzed genes and selected PCR primers used in real-time PCR.

From: The upregulation of thiamine (vitamin B1) biosynthesis in Arabidopsis thaliana seedlings under salt and osmotic stress conditions is mediated by abscisic acid at the early stages of this stress response

Gene

Locus (AGI)

Forward primer (FP)Reverse primer (RP)

Tm FP or RP(°C)

THI1

AT5G54770

CTGCTGAGGATTTGATTGTG

49,7

  

CGATTGTGTGTGGTGGTT

48,0

THIC

AT2G29630

TAGCTTACCACAAGGAGAA

46,8

  

CCAATGGAAAGAGCCACATCA

52,4

TH1

AT1G22940

GTGATCTTCCTGACTCAT

45,8

  

CCAAAGTGCAACCAGTCC

50,3

TPK

AT1G02880

CACGATTCACTCCTCTTCTC

51,8

  

AATTCGTCGTAGATGCGATTAG

52,0

KGDH

AT3G55410

TGCGTCAAACCGGGCTTGTT

53,8

  

AGTTGGCGGGAGTTGTGGCA

55,9

 

AT5G65750

TGCTACCGTCGCTTTGGGCA

55,9

  

TGAAGTGACGAGGGATGACTGCG

58,8

 

AT5G55070

ACCGTTCTTGTCCAGGGTGTCCA

58,8

  

AGGCGGCTAGGGTGCCATCA

57,9

PDH

AT5G50850

TCGGTTTCGCCCTCAAGGCA

55,9

  

GTGGCTCGGTCAAGCGGACG

60,0

 

AT1G59900

TGGTGTGAGGCAGGAACGGG

57,9

  

AGAAGGCTCTGGCATTGGGCA

56,3

 

AT3G52200

CGCCCGGACTTCCTCGCTTC

60,0

  

GCACGCCAAATCGCAGAATGG

56,3

TK

AT3G60750

GCCGTATGAGCCGTTCCAGGT

58,3

  

GAGCCTTCTCCCAGCCAGCA

57,9

 

AT2G45290

ATTGGAGCCGTCACACGCCC

58,3

  

TGGTGGCATCACCCGGAGAG

57,9

DXPS

AT4G15560

TGCAAGCCATTGGACCGTGC

55,9

  

GTGCGGTTGCTGCGATGTGA

55,9

EF-1

AT1G07920

GAGCCCAAGTTTTTGAAGA

46,8

  

CTAACAGCGAAACGTCCCA

51,1