From: smRNAome profiling to identify conserved and novel microRNAs in Stevia rebaudiana Bertoni
miRNA | Sequence | Length | Clones | EST/nt accession no. | Strand | A+U content | Mismatch | miRNA start | miRNA end | EST/nt start | EST/nt end | Precursor |
---|---|---|---|---|---|---|---|---|---|---|---|---|
Stv_1 | AAACGGUGAACAAGAAGAGG | 20 | 1 | BG522782.1 | Plus | 55% | 0 | 1 | 20 | 470 | 489 | YES |
Stv_2 | UGUGAAGGCGGAUGACUGUAU | 21 | 1 | BG523272.1 | Plus | 55% | 0 | 1 | 21 | 216 | 236 | YES |
Stv_3 | UGAGAUGUUCAAUGGAAAGUAA | 22 | 1 | BG526716.1 | Plus | 68.2% | 0 | 1 | 22 | 142 | 163 | YES |
Stv_4 | GAGACUGAUUUCAGAACCGG | 20 | 1 | BG524295.1 | Plus | 50% | 0 | 1 | 20 | 240 | 259 | YES |
Stv_5 | ACGUACGAUCAUUUGGAUAAGAU | 23 | 1 | BG525786.1 | Plus | 65.2% | 0 | 1 | 23 | 167 | 189 | YES |
Stv_6 | UUGAACAAGUAUGGUCGUCCC | 21 | 5 | AY215182.1 | Plus | 52.3% | 0 | 1 | 21 | 435 | 455 | YES |
Stv_7 | UCGUGCUGUUGGGAAGUGGA | 21 | 1 | BG526771.1 | Plus | 42.3% | 0 | 1 | 20 | 327 | 346 | YES |
Stv_8 | CUGACGUGUCACCAUUACGGA | 21 | 1 | BG525715.1 | Minus | 47.6% | 0 | 1 | 21 | 323 | 303 | YES |
Stv_9 | GGUAAAGCACUGUUUCGGUGC | 21 | 1 | BG523023.1 | Plus | 47.6% | 0 | 1 | 21 | 324 | 344 | YES |
Stv_10 | UUGACACUUUCCCGGGACA | 19 | 2 | BG522709.1 | Plus | 42.1% | 0 | 1 | 19 | 95 | 113 | YES |
Stv_11 | GGCGGGCUCAAAUGACGAAUCAU | 23 | 1 | BG524443.1 | Plus | 47.5% | 1 | 1 | 23 | 378 | 400 | YES |
Stv_12 | CUCGCGCUUUGGUUGAAGAAC | 21 | 1 | BG526387.1 | Plus | 47.6% | 0 | 1 | 21 | 266 | 286 | YES |