microRNAs targeting DEAD-box helicases are involved in salinity stress response in rice (Oryza sativa L.)

BMC Plant Biology

Table 2 Prediction of conserved miRNA targets and experimental validation by 5′-RACE

miRNA	miRNA sequence	Predicted targets	Accession no	5′-RACE validation
osa-MIR414	3′- cugcuacuacuacuccuacu – 5′	ABP	LOC_Os06g33520	Yes
		DDX46	LOC_Os08g05810	n.d
		DDX47	LOC_Os03g46610	n.d
		PRP5	LOC_Os08g06344	n.d
		RNAhA	LOC_Os01g56190	n.d
		CTD2	LOC_Os02g43460	n.d
osa-MIR408	3′ - cggucccuucuccgucacguc – 5′	DSHCT	LOC_Os11g07500	Yes
		MIP1	LOC_Os10g41041	n.d
		Plastocyanin	LOC_Os02g43660	Yes [12, 31]
osa-MIR164e	3′ - agugcacgggacgaagaggu – 5′	DBH	LOC_Os04g40970	Yes
		NAC	LOC_Os06g23650	Yes [32]

ISSN: 1471-2229