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Table 4 Identified targets of the novel miRNAs in wild soybean

From: Identification of wild soybean miRNAs and their target genes responsive to aluminum stress

miR_name Target Alignment score Cleavage site Al-treated Al-free  
     Categorya Percentage of cleavage at the expected site Reads at cleavage site (tpb)b Category Percentage of cleavage at the expected site Reads at cleavage site (tpb) Target gene family
PC-46-5p Glyma03g33240 1 2649 2 0.50% 96.53     Cation transporting ATPase
  Glyma05g23260 1.5 3244     2 0.68% 121.15 Protein tyrosine kinase
  Glyma13g03270 3.5 1559 2 1.33% 38.61 2 2.01% 60.57 TPR repeat-containing protein
  Glyma14g23650 3.5 961 2 1.06% 38.61 2 1.47% 60.57 TPR repeat-containing protein
  Glyma19g35960 1 2649 2 0.51% 96.53     Cation transporting ATPase
gso-mir167a-p3 Glyma13g04540 3.5 1822 3 0.07% 58.99     Lipase (class3)
PN-mir156f-p3 Glyma03g27590 3 333 2 0.17% 96.53 2 0.17% 121.15 Transcription elongation factor SPT6
  Glyma19g30560 3 206 2 0.14% 96.53 2 0.25% 121.15 Transcription elongation factor SPT6
  1. a, The numbers represent the four category as follows: 0 indicates category I; 1 indicates category II; 2 indicates category III; 3 indicates category IV.
  2. b, tpb, transcripts per billion.