Table 5 List of putatively new miRNA precursors identified in the Hevea clone PB260 transcriptome sequences
From: Identification of novel microRNAs in Hevea brasiliensisand computational prediction of their targets
MiRNA name | Accession Name | Mature sequence | Mature length | miRNA* (Accession No.) | Precursor length | EST |
|---|---|---|---|---|---|---|
Hbmir156 | acc_462135 | UUGACAGAAGAUAGAGAGC | 19 | Yes (10) | 119 | FYGXE6I01DJH4X_r1 |
Hbmir159 | acc_17403 | UUUGGAUUGAAGGGAGCUCUA | 21 | Yes (5) | 221 | GETTCZF01AWUSL_r1 |
Hbmir166 | acc_28021 | UCGGACCAGGCUUCAUUCC | 19 | Yes (14) | 127 | CL2671Contig1_r1 |
| Â | acc_150486 | UCGGACCAGGCUUCAUUCCCCC | 22 | Yes (14) | 120 | CL1Contig15359_r1 |
Hbmir319 | acc_19786 | UUGGACUGAAGGGAGCUCCCU | 21 | Yes (7) | 221 | FRZQES201D34W3_r1 |
Hbmir396 | acc_112787 | UUCCACAGCUUUCUUGAACUG | 21 | Yes (15) | 154 | CL1Contig13811_r1 |
Hbmir408 | acc_393516 | AAGACUGGGAACAGGCAGAGCA | 22 | Yes (294) | 128 | FYGXE6I01CVDV9_r1 |
| Â | acc_39581 | ACUGGGAACAGGCAGAGCAUGA | 22 | Yes (294) | 120 | CL3908contig1_r1 |
Hbmir476 | acc_508145 | UAAUCCUUCUUUGCAAAGUC | 20 | Yes (1) | 126 | CL1Contig11471_r1 |
Hbmir2910 | acc_251816 | GAGCGAUUUGUCUGGUUAAUC | 21 | Yes (5) | 126 | FYGXE6I01EDXGX_r1 |