Table 4 List of precursors for conserved microRNAs identified in the Hevea clone PB260 transcriptome sequences
From: Identification of novel microRNAs in Hevea brasiliensisand computational prediction of their targets
New miR name | Accession Name | Mature sequence | Mature length | miRNA* (Accession No.) | Precursor length | EST |
|---|---|---|---|---|---|---|
HbmiRn1 | acc_584359 | CAGGAACUGGUAUCAACCCAGC | 22 | nd | 130 | CL1Contig1853_r1 |
HbmiRn2 | acc_495109 | UAUUGUAGAAAUUUUCAGGAUC | 22 | nd | 116 | CL1Contig490_r1 |
HbmiRn3 | acc_185377 | UAAUGGGCUCUGCAUAGAUGG | 21 | Yes (3) | 108 | CL27Contig1_r1 |
HbmiRn4 | acc_108425 | UUGCAUAUCUCAGGAGCUUCA | 21 | Yes (4) | 214 | CL19922Contig1_r1 |
HbmiRn5 | acc_644211 | AAACGGCUACCACAUCCAA | 19 | nd | 87 | FYGXE6I01B755W_r1 |
HbmiRn6 | acc_501419 | UAGGAUGUAGAAGAGCAUAA | 20 | nd | 90 | F5VNCTM02H9XL3_r1 |
HbmiRn7 | acc_35715 | UAGUUUGUUUGAUGGUAUC | 19 | nd | 113 | FYGXE6I01EKFYA_r1 |
HbmiRn8 | acc_246127 | GAUUGACAGACUGAGAGCUC | 20 | Yes (16) | 93 | FYGXE6I01B7GPL_r1 |
HbmiRn9 | acc_103082 | UUUAUGAAAGACGAACAACUG | 21 | Yes (6) | 87 | CL1Contig2798_r1 |