| | |
Normalized counts in each library per million readsa
| | | |
---|
Sequence
|
L
|
miRBase
|
Immature seed tissues
|
Vegetative tissue
|
miRNA gene originsb
|
Putative TAS genec
|
tasiRNA target and annotation
|
---|
| | |
WS
|
SCR
|
SCM
|
SCW
|
Cot
|
GCot
|
ST
|
LE
| | | |
---|
AAGCTCAGGAGGGATAGCGCC
|
21
|
gma-miR390 a/d/e/f-5p
|
456
|
116
|
166
|
113
|
275
|
132
|
20
|
193
|
Gm18: 5,047,835
|
Glyma09g03730.1
|
Glyma07g32300.1 AUX-IAA-ARF
|
| | | | | | | | | | |
Gm18: 53,278,046
|
Glyma15g14670.1
|
Glyma13g24240.2 AUX-IAA-ARF
|
| | | | | | | | | | |
Gm11: 30,272,772
| | |
| | | | | | | | | | |
Gm03: 6,558,249
| | |
| | | | | | | | | | |
Gm01: 42,335,625
| | |
AAGCTCAGGAGGGATAGCACC
|
21
|
gma-miR390b/g-5p
|
24
|
6
|
2
|
2
|
153
|
60
|
165
|
12
|
Gm14: 47,097,986
|
Glyma09g03730.1
|
Glyma07g32300.1 AUX-IAA-ARF
|
| | | | | | | | | | |
Gm12: 44,954,768
|
Glyma15g14670.1
|
Glyma13g24240.2 AUX-IAA-ARF
|
TCTTGCTCAAATGAGTATTCCA
|
22
|
gma-miR828
|
0
|
7
|
6
|
7
|
0
|
0
|
0
|
0
|
Gm12: 3,213,774
|
Glyma20g32510.1
| |
| | | | | | | | | | |
Gm11: 9,033,043
|
Glyma10g35050.1
| |
| | | | | | | | | | | |
Glyma20g32500.1
| |
| | | | | | | | | | | |
Glyma09g37340.1
| |
- aLibrary abbreviations are in Table 1. bThe position of the miRNA hairpin in the Glycine max reference genome is shown. cThe gene model (Glyma number) of the putative TAS genes in soybean.
- L = sequence length.