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Table 1 Overview of sequencing and assembly

From: High-throughput sequencing of black pepper root transcriptome

Raw data  
 Total number of reads 71878419
 Number of unique high-quality reads 13300000
 Number of contigs obtained with Velvet/Oases/STM- 22363
Unigenes dataset  
 Unigenes number 10338
 Total size (bp) 1787600
 Largest transcript length (bp) 1314
 N50 length (bp) 168
 No ATGC characters 18
 Average coverage per base 62
Predicted proteins  
 Predicted CDS (partial/complete) 4472
Gene expression  
 Reads mapped in transcripts 71148200
 Most expressed transcript (rpkm) 68250
  1. bp: base pair; rpkm: read coverage normalized per million mapped nucleotides and the length of unigene.