Table 1 Distribution of disordered segments with L ≥ 30 in protein sequences from plant proteomes
From: Protein disorder in plants: a view from the chloroplast
Proteomes | AT | CP | PT | VV | OS | SB | ZM | GM | PP | CR | MCR | OT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Nuclear proteomes | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
N-terminal (40 aa) | 25512 / 97853 26.07% | 24444 / 80869 30.22% | 34479 / 126754 27.20% | 24524 / 92151 26.61% | 42303 / 148406 28.50% | 29680 / 115497 25.70% | 29628 / 114125 25.96% | 40313 / 167551 24.06% | 31926 / 130425 24.48% | 13158 / 63766 20.63% | 9566 / 46371 20.63% | 8069 / 33395 24.16% |
Internal part | 56422 / 97853 57.66% | 40528 / 80869 50.11% | 68242 / 126754 53.84% | 51256 / 92151 55.62% | 79257 / 148406 53.40% | 66199 / 115497 57.32% | 65801 / 114125 57.66% | 100443 / 167551 59.95% | 76575 / 130425 58.71% | 41269 / 63766 64.72´% | 30027 / 46371 64.75% | 19871 / 33395 59.50% |
C-terminal (40 aa) | 15919 / 97853 16.27% | 15897 / 80869 19.66% | 24033 / 126754 18.96% | 16371 / 92151 17.76% | 26846/ 148406 18.09% | 19618 / 115497 16.98% | 18696 / 114125 16.38% | 26795 / 167551 15.99% | 21924 / 130425 16.81% | 9339 / 63766 14.64% | 6778 / 46371 14.62% | 5455 / 33395 16.33% |
Chloroplast proteomes | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
N-terminal (40 aa) | 46 / 138 33.33% | 50 / 154 32.47% | 66 / 170 38.82% | 49 / 156 31.41% | 66 / 151 43.71% | 49 / 118 41.52% | 64 / 148 43.24% | 48 / 141 34.04% | 52 / 145 35.86% | 36 / 205 17.56% | 29 / 76 38.15% | 33 / 96 34.37% |
Internal part | 55 / 138 39.85% | 63 / 154 40.91% | 55 / 170 32.35% | 63 / 156 40.38% | 33 / 151 21.85% | 28 / 118 23.73% | 38 / 148 25.67% | 56 / 141 39.72% | 51 / 145 35.17% | 137 / 205 66.83% | 20 / 76 26.31% | 33 / 96 34.37% |
C-terminal (40 aa) | 37 / 138 26.81% | 41 / 154 26.62% | 49 / 170 28.82% | 44 / 156 28.20% | 52 / 151 34.43% | 41 / 118 34.74% | 46 / 148 31.08% | 37 / 141 26.24% | 42 / 145 28.96% | 32 / 205 15.61% | 27 / 76 35.52% | 30 / 96 31.25% |
Mitochondrial proteomes | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
N-terminal (40 aa) | 85 / 236 36.02% | - | - | 49 / 143 34.26% | 37 / 129 28.68% | 22 / 74 29.73% | 147 / 364 40.38% | - | 25 / 71 35.21% | 5 / 20 25.00% | 21 / 62 33.87% | 18 / 50 36.00% |
Internal part | 78 / 236 33.05% | - | - | 46 / 143 32.17% | 58 / 129 44.96% | 34 / 74 45.94% | 124 / 364 34.06% | - | 25 / 71 35.21% | 7 / 20 35.00% | 22 / 62 35.48% | 14 / 50 28.00% |
C-terminal (40 aa) | 73 / 236 30.93% | - | - | 48 / 143 33.57% | 34 / 129 26.35% | 18 / 74 24.32% | 93 / 364 25.55% | - | 21 / 71 29.58% | 8 / 20 40.00% | 19 / 62 30.64% | 18 / 50 36.00% |