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Table 3 Classification of repetitive elements in the assembled sequence

From: Intraspecific sequence comparisons reveal similar rates of non-collinear gene insertion in the B and D genomes of bread wheat

Class

Order

Superfamily

No. elements

Cumulative length

Retrotransposons

  

116

663,798 (62.7%)

 

LTR_retrotransposons

 

108

647,191 (61.1%)

  

Copia

46

236,440 (22.3%)

  

Gypsy

50

354,331 (33.4%)

 

LINE

 

8

16,607 (1.6%)

DNA transposons

  

92

267,505 (25.2%)

 

TIR

 

90

266,656 (25.2%)

  

CACTA

39

256,633 (24.2%)

  

Harbinger

2

433 (0.0%)

  

Mutator

4

3,609 (0.3%)

  

Mariner

41

5,096 (0.5%)

Unclassified

  

349

128,095 (12.1%)

Total

  

557

1,059,398 (100%)