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Table 1 Output of large scale RNA-seq and sequence assembly

From: A putative role for amino acid permeases in sink-source communication of barley tissues uncovered by RNA-seq

 

Flag leaf

Glumes

Grains

Total reads

615,568

485,800

484,443

Ø Read length

397

400

392

Total contigs

43,467

31,022

37,790

Ø Reads/contig

12

15

11

Ø Contig size

688

835

791

Total singletons

97,348

29,388

82,446