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Table 1 Numbers of mapped reads

From: Global transcriptome analysis reveals distinct expression among duplicated genes during sorghum-Bipolaris sorghicolainteraction

Sample Total reads (%) Total mapped (%) Mapped on genome Mapped on junction Total unmapped (%)
Unique (%) Multiple (%) Unique (%) Multiple (%)
control 34,569,214 28,260,814 23,433,563 1,753,559 2,995,861 77,831 6,308,400
  100 81.8 67.8 5.1 8.7 0.2 18.2
infected 28,695,822 23,451,544 19,501,177 1,448,478 2,437,660 64,229 5,244,278
  100 81.7 68.0 5.0 8.5 0.2 18.3
  1. Numbers of reads and percentages of the total reads (Total reads) are shown, as are the total numbers of reads mapped (Total mapped), reads mapped uniquely to the sorghum genome (Mapped on genome – unique), reads mapped to multiple loci of the sorghum genome (Mapped on genome – multiple), reads mapped uniquely to a predicted exon–exon bridging sequence (Mapped on junction – unique), reads mapped to multiple loci of the exon–exon bridging sequences (Mapped on junction – multiple), and reads unable to be mapped (Total unmapped).