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Table 3 Composition of the mRNA degradome libraries

From: miRNA regulation in the early development of barley seed

Degradome length Sequences (million) Signatures (million)
A B C Total A B C Total
20-36 nt 29.741 29.282 27.365 86.389 3.800 5.526 3.168 10.147
20 nt 13.150 11.949 12.103 37.203 1.724 2.393 1.411 4.502
21 nt 16.525 17.239 15.188 48.952 2.066 3.110 1.746 5.607
20-21 nt pooled 29.675 29.188 27.291 86.155 3.433 4.814 2.928 8.857
  1. Number of sequences and signatures (unique sequences) of mRNA degradation products found in the degradome libraries made from whole caryopsis tissue at the three developmental stages A (1–5 DPA), B (6–10 DPA) and C (11–15 DPA). The 20–21 nt pooled degradome sequences combine the 20 nt and 21 nt sequences shortened to 20 nt by removing the 3’end nucleotide.