From: miRNA regulation in the early development of barley seed
Row | EST ID | pri-miRNA | miRNA | miRNA sequence (5’-3’) | Length | RPM-A | RPM-B | RPM-C | Star |
---|---|---|---|---|---|---|---|---|---|
1 | U21_20916 | hvu-MIR159a | hvu-miR159 | TTTGGATTGAAGGGAGCTCTG | 21 | 2.74 | 2.16 | 1.29 | YES |
2 | U21_9346 | hvu-MIR168 | hvu-miR168a | TCGCTTGGTGCAGATCGGGAC | 21 | 5891.89 | 16016.44 | 12430.78 | YES |
3 | U21_38648 | hvu-MIR171 | hvu-miR171a | TGATTGAGCCGTGCCAATATC | 21 | 13.41 | 5.13 | 3.87 | YES |
4 | U21_6953 | hvu-MIR444a | hvu-miR444a | TTGTGGCTTTCTTGCAAGTCG | 21 | 0.41 | 0.41 | 0.26 | NO |
5 | U21_50801 | hvu-MIR5051 | hvu-miR5051 | TTTGGCACCTTGAAACTGGGA | 21 | 0.41 | 0.54 | 0.39 | NO |
6 | U21_37849 | hvu-MIR1135 | Hvu-miR1135 | TGCGACAAGTAATTCCGGACGGAG | 24 | 0.27 | 0.68 | 1.68 | NO |
7 | U21_8425 | hvu-MIR1436b | hvu-miR1436b | TACATTATGGGACGGAGGGAG | 21 | 0.82 | 1.08 | 0.26 | NO |
8 | U21_2275 | hvu-MIR5048 | hvu-miR5048 | TATTTGCAGGTTTTAGGTCTAA | 22 | 111.82 | 122.18 | 89.92 | YES |
9 | U21_14449 | hvu-MIR5071b | hvu-miR5071b | TCAAGCATCATGTCATGGACC | 21 | 0.55 | 0.54 | 0.26 | NO |
10 | U21_51424 | hvu-MIR6001 | hvu-miR6001 | CGAGGATGAAGAAGAAAAT | 19 | 3.15 | 1.62 | 0.90 | NO |
11 | U21_16909 | hvu-MIR6002 | hvu-miR6002 | TAGGACGCCATGGTAGATAGCATG | 24 | 0.00 | 1.22 | 1.03 | NO |
12 | U21_27580 | hvu-MIR6003 | hvu-miR6003 | AATATGGATCGGAGGGAGTAA | 21 | 0.68 | 0.95 | 0.52 | NO |
13 | U21_53039 | hvu-MIR6004 | hvu-miR6004 | TTGCGTCGTTGTGCCTGGGCT | 21 | 0.96 | 0.41 | 0.00 | NO |
14 | U21_51897 | hvu-MIR6005 | hvu-miR6005 | AATTAATTTGGATCGGAGGGA | 21 | 0.41 | 0.27 | 0.65 | NO |
15 | U21_16332 | hvu-MIR1120 | hvu-miR1120b | TTCTTATATTATGGGACGGAG | 21 | 4.11 | 4.46 | 5.29 | NO |