Skip to main content

Table 1 Composition of the smRNA libraries

From: miRNA regulation in the early development of barley seed

smRNA length Sequences (million) Signatures (million)
A B C Total A B C Total Singletons >1RPM
1-36 nt 6.608 6.567 6.904 20.079 1.511 2.251 2.397 6.159    
18-25 nt 5.284 5.214 4.837 15.335 1.336 2.046 2.159 4.801 3.900 81% 0.137
19-23 nt 1.682 1.806 1.910 5.398 0.449 0.560 0.507 1.313 1.080 82% 0.041
21 nt 0.410 0.500 0.530 1.440 0.100 0.110 0.090 0.249 0.200 80% 0.008
24 nt 3.240 3.100 2.590 8.930 0.800 1.400 1.570 3.268 2.640 81% 0.090
  1. Number of sequences and signatures (unique sequences) for different length of smRNAs found in smRNA libraries made from whole caryopsis tissue at the three developmental stages: A (1–5 DPA), B (6–10 DPA) and C (11–15 DPA). Singletons are the signatures found only once. The column “>1 RPM” shows the number of signatures with more than 1 Read Per Million (RPM).