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Table 2 The genes identified in non-TE and nonrepeated sequences of BAC_2383A24.

From: The impact of Ty3-gypsy group LTR retrotransposons Fatima on B-genome specificity of polyploid wheats

Identified genes Hypothetical function Positions in 2383A24 Protein length, residues Support level
2383A24.1 Conserved hypothetical, transferase domain containing 9737 to 11 026 429 Similar to rice Os04g0194400 (58% identity, 100% coverage) Os04g0175500 (58% identity, 99% coverage EST support: +
2383A24.2 Putative decarboxylase protein 14 749 to 16 257 502 Similar to rice Os08g0140300 (79% identity, 100% coverage), to barley BAD11769.1 tryptophan decarboxylase (80% identity, 100% coverage) EST support: +
2383A24.3 Conserved hypothetical, transferase domain containing 19 745 to 21 019 424 Similar to rice Os04g0194400 (59% identity, 100% coverage) Os04g0175500 (59% identity, 99% coverage) EST support: +
2383A24.4 Unknown 26 839 to 27 333 164 Similar to rice Os01g0121600 (57% identity, 83% coverage) EST support: +
2383A24.5 Unknown 33 063 to 33 407 114 Similar to rice Os01g0121600 (73% identity, 88% coverage) EST support: +
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