Class, order, superfamily, family | Copy number | Sequence length, bp | Fraction in complete BAC_2383A24 sequence, % |
---|---|---|---|
Class I elements (Retrotransposons) | 11 | 58 604 | 51.6 |
LTR retrotransposons | 10 | 57 590 | 50.7 |
gypsy | 6 | 31708 | 27.9 |
RLG_Egug_2383A24_solo_LTR | 1 | 1503 | Â |
RLG_Wilma_2383A24_solo_LTR | 1 | 1490 | Â |
RLG_Sabrina_2383A24-1p | 1 | 1505 | Â |
RLG_Fatima_2383A24-1p, -2, and -3 | 3 | 27 210 | Â |
copia | 3 | 24 316 | 21.4 |
RLC_WIS_2383A24-1 | 1 | 8353 | Â |
RLC_Barbara_2383A24-1p | 1 | 6384 | Â |
RLC_Claudia_2383A24-1p | 1 | 9579 | Â |
Unknown LTR retrotransposons RLX_Xalax_2383A24-1p | 1 | 1566 | 1.4 |
Non-LTR retrotransposons LINE, RIX_2383A24-1p | 1 | 1014 | 0.9 |
Class II elements (DNA transposons)CACTA, DTC_Caspar_2383A24-1p | 1 | 3693 | 3.3 |
MITE | 6 | 747 | 0.7 |
Other known repeatsSpelt1 tandem repeats | 6 | 1010 | 0.9 |
Genes | 5 | 4913 | 4.3 |
Unassigned sequences | Â | Â | 39.2 |