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Table 7 Up- or down-regulation of genes involved in protein degradation by proteases or proteosomal machenery in transgenic HC-Pro plants

From: HC-Pro silencing suppressor significantly alters the gene expression profile in tobacco leaves and flowers

Leaf   
EST/mRNA Fold Description
EB438380 27.5 Solanum lycopersicum unknown trypsin inhibitor-like protein precursor
FG637943 14.2 Arabidopsis thaliana FKF1 (FLAVIN-BINDING, KELCH REPEAT, F BOX 1)
TA13877_4097 10.9 Nicotiana glutinosa putative proteinase inhibitor mRNA
TA12601_4097 4.6 Acyrthosiphon pisum ubiquitin ligase E3
CV019298 3.3 Solanum tuberosum metallocarboxypeptidase inhibitor IIa
CV018626 3.0 Ricinus communis Serine carboxypeptidase, putative, mRNA, AT3 g45010/F14D17_80
FG643489 2.8 Arabidopsis thaliana AtPP2-B13 (Phloem protein 2-B13); carbohydrate binding F-box protein 3
TA17751_4097 2.6 Development and cell death domain, the KELCH repeats and ParB domain.
CV018465 2.4 Subtilisin-like protease related cluster
BP133434 2.4 Ricinus communis protein binding protein, putative, mRNA (ubiquitin protein ligase)
TA17959_4097 2.3 Mirabilis jalapa, ubiquitin ligase
FG635491 2.1 Ricinus communis RING-H2 finger protein ATL2B, putative, mRNA
BP530000 2.1 Kelch repeat-containing F-box protein-like
FG137301 2.1 Tomato ATP-dependent protease (CD4A)
TA18536_4097 0.2 Arabidopsis thaliana LKua-ubiquitin conjugating enzyme, F19K23.12 protein
CV019784 0.4 Lycopersicum esculentum mRNA for serine protease, SBT1
EB429242 0.4 LIM, zinc-binding; Ubiquitin interacting motif; Peptidase M, neutral zinc metallopeptidases,
  1. Statistical significance was tested using Student's t-test (p < 0.05).
  2. Fold change is indicated as a ratio of HC-Pro/WT calculated from normalized median intensity values (n = 3).