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Table 5 Up- or down-regulation of cell wall related transcripts in HC-Pro transgenic plants

From: HC-Pro silencing suppressor significantly alters the gene expression profile in tobacco leaves and flowers

Leaf

  

EST/mRNA

Fold

Description

TA16228_4097

6.1

Nicotiana tabacum mRNA for DC1.2 homologue, PME inhibitor

FG195661

6.0

Nicotiana tabacum cysteine-rich extensin-like protein-4

DV157917

2.7

Lycopersicon esculentum xyloglucan endotransglycosylase LeXET2 (LeXET2)

EB425603

2.4

Solanum lycopersicum Polygalacturonase inhibitor protein precursor, PGIP

AB176522

2.4

Glucosyltransferase NTGT4 related cluster

AB176524

2.4

Nicotiana tabacum, Glycosyltransferase NTGT5b

TA13721_4097

2.4

Solanum tuberosum Expansin-like protein precursor

EB444508

2.3

Phaseolus vulgaris Hydroxyproline-rich glycoprotein

CV017677

2.1

Nicotiana tabacum mRNA for pectin methylesterase

DV160974

0.3

Nicotiana tabacum alpha-expansin precursor (Nt-EXPA4) mRNA

EB426691

0.4

Ricinus communis cinnamoyl-CoA reductase, putative, mRNA, lignin biosynthesis

TA19759_4097

0.4

Arabidopsis thaliana Putative cellulose synthase

FG152217

0.5

Arabidopsis thaliana polygalacturonase (PG)

EB424698

0.4

Arabidopsis thaliana pectin acetyl estrase

FG179245

0.4

Arabidopsis thaliana pectin acetylesterase family protein

Flower

  

EH623866

3.9

Solanum lycopersicum Xyloglucan endotrans-glucosylase-hydrolase XTH3

EB450248

2.3

Lycopersicon esculentum Xyloglycan endotransglycosylase precursor

FG644421

2.2

Ricinus communis Glycine-rich cell wall protein

EB428200

0.3

Petunia integrifolia Pectinesterase precursor

BP133533

0.3

COBRA-like protein 10 precursor related cluster

EB428683

0.3

Nicotiana tabacum pectate lyase Nt59

TC6632

0.3

Arabidopsis thaliana Cellulose synthase

EB427886

0.3

Vigna radiata Pectinacetylesterase precursor

FG155250

0.3

Nicotiana tabacum pectin methylesterase (PPME1) mRNA

  1. Transcripts encoding pectin, lignin and extensin synthesis and degradation were altered significantly (p < 0.05) in HC-Pro transgenic plants.
  2. Fold change is indicated as a ratio of HC-Pro/WT calculated from normalized median intensity values (n = 3).