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Table 1 Summary of the EST assembly for SNP discovery

From: High-throughput SNP genotyping in the highly heterozygous genome of Eucalyptus: assay success, polymorphism and transferability across species

Sequencing

technology

Eucalyptus

species

# sequences used

for clustering

# sequences in

the assembly

Sanger

E. grandis

67,635

50,720

 

E. globulus

30,260

10,088

 

E. urophylla

7,755

4,387

 

E. gunnii

19,586

7,018

 

E. pellita

9,679

4,959

 

E. tereticornis

1,126

1,095

454

E. grandis

1,028,654

623,922

TOTAL

 

1,164,695

702,009