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Table 6 Expression of genes up- and down-regulated in different ROS accumulating conditions.

From: Reactive oxygen species and transcript analysis upon excess light treatment in wild-type Arabidopsis thaliana vs a photosensitive mutant lacking zeaxanthin and lutein

UP regulated

          

Probeset

Locus identifier

flu

n1l2

Ozono

MV 2 h

MV 4 h

vte2

vte1

cat

DCMU

Description

253259_at

At4g34410

6,60

1,29

2,17

1,21

-0,24

-1,13

0,20

-2,93

-0,62

RRTF1, AP2 domain-containing transcription factor

253832_at

At4g27654

6,23

1,02

0,77

0,53

1,53

0,88

1,29

-3,59

 

unknown protein

248793_at

At5g47240

5,78

1,17

2,21

0,35

1,04

0,20

-0,11

-2,20

 

ATNUDT8, Nudix hydrolase homolog 8

247360_at

At5g63450

5,51

1,21

1,47

2,84

1,08

0,19

-0,80

-0,81

 

CYP94B1, oxygen binding cytochrome P450

266821_at

At2g44840

5,40

1,03

2,60

2,75

1,79

0,28

0,36

-2,74

-0,40

Ethyne responsive element binding factor 13

262354_at

At1g64200

4,82

2,21

1,36

-0,10

0,23

-0,02

-0,50

0,03

 

Vacuolar H+-ATPase subunit 3

247030_at

At5g67210

4,62

1,22

1,19

-0,33

0,11

-0,10

-2,48

-1,03

 

nucleic acid binding/putative ribonuclease

256021_at

At1g58270

3,92

4,23

0,36

0,30

-0,60

0,41

-0,18

-0,80

 

ZW9

266977_at

At2g39420

3,66

1,45

1,63

0,26

-0,05

-0,10

0,27

-0,75

-0,34

esterase/lipase/thioesterase family protein

255941_at

At1g20350

3,33

1,46

4,30

0,30

-0,18

-2,10

1,05

1,08

 

TIM17, mitochondrial inner membrane translocase

263320_at

At2g47180

3,10

1,10

1,71

-0,24

0,82

2,04

0,99

-0,36

 

AtGOLS1 Galactinol Synthase 1

266418_at

At2g38750

2,47

1,31

0,80

-0,42

-0,69

1,04

-1,97

0,09

-0,43

ANNAT4, Annexin Arabidopsis 4; calcium ion binding

264986_at

At1g27130

2,46

1,07

1,52

-0,08

0,72

-0,21

-0,36

0,52

 

ATGSTU13, glutathione S-transferase 13

DOWN regulated

          

Probeset

Locus identifier

flu

n1l2

Ozono

MV 2 h

MV 4 h

vte2

vte1

cat

DCMU

Description

247638_at

At5g60490

-2,44

-0,92

0,01

-0,22

0,17

0,30

0,60

0,17

 

FLA12__FLA12 (fasciclin-like arabinogalactan-protein 12)

252573_at

At3g45260

-2,38

-0,37

0,19

0,73

0,37

-0,43

0,13

0,05

 

zinc finger (C2H2 type) family protein

258370_at

At3g14395

-2,46

-0,69

0,07

-2,76

-0,01

-0,03

1,29

0,47

 

unknown protein

255149_at

At4g08150

-2,85

-0,97

-0,23

-1,98

1,33

0,25

-0,10

-0,38

 

KNAT1_BP__KNAT1 (BREVIPEDICELLUS 1); transcription factor

259903_at

At1g74160

-2,34

-0,72

0,26

-0,26

0,16

0,05

0,25

-0,58

 

unknown protein

262783_at

At1g10850

-2,47

-0,37

-0,27

0,07

0,41

-0,21

-0,67

-0,10

 

ATP binding/protein serine/threonine kinase

261883_at

At1g80870

-2,43

-0,48

-0,55

-0,36

-0,01

0,84

0,85

0,44

 

protein kinase family protein

247463_at

At5g62210

-2,77

-0,91

-1,24

1,16

-0,22

0,36

-1,72

-1,66

 

embryo-specific protein-related

252746_at

At3g43190

-3,53

-0,51

0,19

0,89

-0,40

-0,31

-1,83

-0,10

 

SUS4__SUS4; UDP-glycosyltransferase/sucrose synthase

250891_at

At5g04530

-2,64

-0,47

-0,35

-0,52

0,27

-0,10

-0,22

-1,34

 

beta-ketoacyl-CoA synthase family protein

260693_at

At1g32450

-2,51

-0,26

-0,23

-0,21

0,22

-0,85

-0,70

-0,50

 

proton-dependent oligopeptide transport (POT) family protein

250344_at

At5g11930

-2,82

-0,97

0,14

-0,39

-1,01

-0,45

0,38

-1,17

 

glutaredoxin family protein

  1. The transcription regulation of genes specifically responding to 1O2 in flu and npq1lut2 mutants was compared to various experiments by using mutants and/or treatments. The ratio between treated and control plants is expressed as a log2 scale. For each sample, the average of three repetitions was considered.