Skip to main content

Table 2 Structure analysis for orthologs of fiber development genes in four cotton species

From: Structure, expression differentiation and evolution of duplicated fiber developmental genes in Gossypium barbadense and G. hirsutum

Gene Numbers of exon Length of ORF(bp)/numbers of derived amino acids
14-3-3L 7 762/253
CAP A1, Ath and Atb: 10; D5, Dth and Dtb: 9 A1, Ath and Atb: 1416/471; D5, Dth and Dtb: 1338/445
CEL 6 1860/619
CIPK1 1 A1, Ath and Atb: 1341/446; D5, Dth and Dtb: 1347/448
BG Dth: 7; Dtb: 8; A1, D5, Ath and Atb: 9 Dth: 1050/349; Dth: 1365/454; A1, D5, Ath and Atb: 1884/627
Exp1 3 777/258
Exp 3 780/259
POD2 3 984/327
RacA 8 636/211
RacB 7 588/195
Sus1 12 2418/805
Pel 3 1236/411
ManA2 Ath: 11; Atb: 9; A1, D5, Dth and Dtb: 11 Ath: 2925/974; Atb: 1380/459; A1, D5, Dth and Dtb: 2931/976
CelA1 12 2925/974
CelA3 Ath and Atb: 8; A1, D5, Dth and Dtb: 14 Ath and Atb: 2055/684; A1, D5, Dth and Dtb: 3204/1067
ACT1 4 1134/377
LTP3 1 363/120
  1. A1 = G. herbaceum L. var. africanum, D5 = G. raimondii Ulbr, Ath = A subgenome of G. hirsutum L. acc. TM-1, Dth = D subgenome of G. hirsutum L. acc. TM-1, Atb = A subgenome of G. barbadense L. cv. 7124, Dtb = D subgenome of G. barbadense L. cv. 7124.
Back to article page

BMC Plant Biology

ISSN: 1471-2229

Contact us

\