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Table 2 Structure analysis for orthologs of fiber development genes in four cotton species

From: Structure, expression differentiation and evolution of duplicated fiber developmental genes in Gossypium barbadense and G. hirsutum

Gene

Numbers of exon

Length of ORF(bp)/numbers of derived amino acids

14-3-3L

7

762/253

CAP

A1, Ath and Atb: 10; D5, Dth and Dtb: 9

A1, Ath and Atb: 1416/471; D5, Dth and Dtb: 1338/445

CEL

6

1860/619

CIPK1

1

A1, Ath and Atb: 1341/446; D5, Dth and Dtb: 1347/448

BG

Dth: 7; Dtb: 8; A1, D5, Ath and Atb: 9

Dth: 1050/349; Dth: 1365/454; A1, D5, Ath and Atb: 1884/627

Exp1

3

777/258

Exp

3

780/259

POD2

3

984/327

RacA

8

636/211

RacB

7

588/195

Sus1

12

2418/805

Pel

3

1236/411

ManA2

Ath: 11; Atb: 9; A1, D5, Dth and Dtb: 11

Ath: 2925/974; Atb: 1380/459; A1, D5, Dth and Dtb: 2931/976

CelA1

12

2925/974

CelA3

Ath and Atb: 8; A1, D5, Dth and Dtb: 14

Ath and Atb: 2055/684; A1, D5, Dth and Dtb: 3204/1067

ACT1

4

1134/377

LTP3

1

363/120

  1. A1 = G. herbaceum L. var. africanum, D5 = G. raimondii Ulbr, Ath = A subgenome of G. hirsutum L. acc. TM-1, Dth = D subgenome of G. hirsutum L. acc. TM-1, Atb = A subgenome of G. barbadense L. cv. 7124, Dtb = D subgenome of G. barbadense L. cv. 7124.