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Table 6 Features of the QTLs identified in the B73 × Gaspé Flint introgression library

From: Genetic dissection of maize phenology using an intraspecific introgression library

Trait QTL a Bin cM b Marker interval c Effect d P
DPS   1.02-03 25.8 - 69.6 bnlg1007 -1.6 0.01
   1.05-06 108.7 - 134.0 umc1395 -1.6 0.001
   3.05-07 69.2 - 144.5 umc1167-umc1528 -1.5 0.001
   8.05 70.7-91.6 vgt1-umc1846 -2.4 0.001
   9.03-04 59.2 - 82.4 umc1271-umc1771 -1.1 0.001
GDU   1.02-03 25.8 - 69.6 bnlg1007 -21.1 0.01
   1.05-06 108.7 - 134.0 umc1395 -20.6 0.001
   3.05-07 69.2 - 144.5 umc1167-umc1528 -17.8 0.001
   8.05 70.7 - 91.6 vgt1-umc1846 -33.3 0.001
   9.03-04 59.2 - 82.4 umc1271-umc1771 -13.5 0.001
INDL   9.03-04 59.2 - 82.4 umc1271-umc1771 0.5 ns (0.10)
ND qVgt-1.02/3 1.02-03 25.8 - 69.6 bnlg1007 -0.8 0.001
  qVgt-1.05/6 1.05-06 108.7 - 134.0 umc1395 -0.9 0.001
  qVgt-3.03 3.03 36.1 - 49.2 umc1030 -0.7 0.01
  qVgt-3.05/7 3.05-07 69.2 - 144.5 umc1167-umc1528 -1.1 0.001
  qVgt-4.04/5 4.04-05 58.8 - 82.6 bnlg490-bnlg1265 -0.4 0.05
  Vgt1-Vgt2 8.05 70.7 - 91.6 vgt1-umc1846 -2.0 0.001
  qVgt-9.03/4 9.03-04 59.2 - 82.4 umc1271-umc1771 -0.7 0.001
  qVgt-10.04/5 10.04-05 43.8 - 97.7 umc2163-bnlg1250 -1.0 0.001
NDAE   4.04-05 58.8 - 82.6 bnlg490-bnlg1265 -0.3 0.05
   3.05-07 69.2 - 144.5 umc1167-umc1528 -0.3 0.05
   8.05 70.7 - 91.6 vgt1-umc1846 -0.8 0.001
NDBE   1.02-03 25.8 - 69.6 bnlg1007 -0.6 0.01
   1.05-06 108.7 - 134.0 umc1395 -0.5 0.01
   3.05-07 69.2 - 144.5 umc1167-umc1528 -0.7 0.001
   8.05 70.7 - 91.6 vgt1-umc1846 -1.1 0.001
   9.03-04 59.2 - 82.4 umc1271-umc1771 -0.5 0.01
   10.04-05 43.8 - 97.7 umc2163-bnlg1250 -0.6 0.01
PH   1.05-06 108.7 - 134.0 umc1395 -17.4 0.01
   3.05-07 69.2 - 144.5 umc1167-umc1528 -14.0 0.05
   8.05 70.7 - 91.6 vgt1-umc1846 -26.0 0.001
   10.04-05 43.8 - 97.7 umc2163-bnlg1250 -17.4 0.01
  1. a QTL codes are given for the trait ND only (see text).
  2. b Position of the QTLs based on the Gaspé Flint introgressions position and length, as estimated on the reference maize map "Genetics 2008" http://www.maizegdb.org/map.php.
  3. c Markers or marker-intervals delimiting the Gaspé Flint introgressions at the QTL chromosome regions.
  4. d QTL genetic effects computed as (ILLs - B73)/2, where ILLs is the trait mean value of all IL lines sharing the same introgression at the QTL region.