Table 5 Summary of chickpea CBL- CIPK- and AGP-annotated UniTags in chickpea roots and nodules
From: The salt-responsive transcriptome of chickpea roots and nodules via deepSuperSAGE
| Â | UniTag ID | Sequence | Uniprot ID | Gene class | R(ln)Roots | R(ln)Nodules |
|---|---|---|---|---|---|---|
CBL proteins | STCa-10400 | CATGCTTGTTATAGTTAGCCTTTCTC | Q5EE13_9FABA | CBL | -0,21 | -0,16 |
| Â | STCa-8869 | CATGCCTTACTTTGGGTGTGACGATT | Q7FZ95_EUCGR | CBL | 0,89 | -0,16 |
| Â | STCa-12426 | CATGGATGTGGAAAATGAAATCCTTG | CNBLA_ARATH | CBL 10 | -0,90 | 0,53 |
| Â | STCa-7792 | CATGCATATGTACTGAACCCAGTTAA | A4ZKI5_POPTR | CBL 4-1 | -2,00 | -0,16 |
CIPK proteins | STCa-4035 | CATGAGTTTGAGATTTGTACTGTTGT | Q8LK24_SOYBN | CIPK | 0,20 | -0,16 |
| Â | STCa-1179 | CATGAAGAATCCTTGTTGATGATTCA | Q8LK24_SOYBN | CIPK | 1,99 | -0,38 |
| Â | STCa-21948 | CATGTGTTACTTGGGAGTGTCTGGTT | A0MNJ9_POPTR | CIPK 12 | 1,58 | 1,63 |
| Â | STCa-19413 | CATGTCAAACTACAGCAGCTGAAGCT | A0MNK6_POPTR | CIPK 19 | -1,60 | -0,85 |
| Â | STCa-19111 | CATGTATGTATGGATATATATATACT | A0MNK8_POPTR | CIPK 22 | 0,89 | 0,53 |
| Â | STCa-5485 | CATGATGTTATTATTTTTGATTTGAT | A0MNL1_POPTR | CIPK 25 | -0,21 | 0,53 |
| Â | STCa-21387 | CATGTGGTGTTATTCTCTTTGTTCTT | A0MNL1_POPTR | CIPK 25 | 0,48 | -1,55 |
| Â | STCa-12635 | CATGGCAAGGAGAACAACCACAGCAA | A0MNL4_POPTR | CIPK 6 | -2,80 | -0,72 |
| Â | STCa-132 | CATGAAAAGAATAGTGGGTAGTGTTT | CIPK7_ARATH | CIPK 7 | -0,21 | -0,85 |
| Â | STCa-6698 | CATGCAATGTAATATAAGACCCTAAT | CIPK9_ARATH | CIPK 9 | -1,19 | 1,92 |
AGP proteins | STCa-17547 | CATGTAATGTAATATTGTTGAATGAA | Q8L5F8_CICAR | AGP | -- | 0,53 |
| Â | STCa-18898 | CATGTATCATTTATTTTCTTTTTTTG | Q9XIV1_CUCSA | AGP | 1,40 | 0,53 |
| Â | STCa-17548 | CATGTAATGTAATATTGTTGTGAAAA | Q8L5F8_CICAR | AGP | 0,89 | -- |
| Â | STCa-17550 | CATGTAATGTAATATTGTTGTGATTT | Q8L5F8_CICAR | AGP | -0,12 | 0,28 |
| Â | STCa-23251 | CATGTTGATGTTGGAGAGAGGGCTTT | AGP20_ARATH | AGP | 0,53 | 0,22 |
| Â | STCa-17544 | CATGTAATGTAATATCGTTGTGATTT | Q8L5F8_CICAR | AGP | 0,48 | -- |
| Â | STCa-17549 | CATGTAATGTAATATTGTTGTGATTA | Q8L5F8_CICAR | AGP | 0,48 | -- |
| Â | STCa-19513 | CATGTCACAACTCATAAAAAAGTACA | Q8L5F8_CICAR | AGP | -- | -0,16 |
| Â | STCa-21051 | CATGTGGAGTAGTTTGATTTGTGCAG | Q8L5F8_CICAR | AGP | -0,21 | -- |
| Â | STCa-635 | CATGAAATGTAATATTGTTGTGATTT | Q8L5F8_CICAR | AGP | -- | -0,85 |
| Â | STCa-23101 | CATGTTGAAGTGAAATATGAAATGAA | A7J385_GOSHI | AGP | 0,48 | -0,85 |
| Â | STCa-8606 | CATGCCCTCACCTCTCCTTTCATCAT | AGP25_ARATH | AGP | -1,60 | -1,55 |