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Table 3 Overlapping transcriptome responses of UniTags that are highly up-regulated in roots and nodules upon salt stress

From: The salt-responsive transcriptome of chickpea roots and nodules via deepSuperSAGE

Tag ID Protein Fold induction (roots) Fold induction (nodules) Associated process Uniprot ID
STCa-18884 Early nodulin 60,95 61,44 Nodulation NO40_SESRO
STCa-22299 Predicted protein 20,70 13,65 Unknown A9TXV0_PHYPA
STCa-17434 Chitinase-related agglutinin 18,67 13,65 Defense A1YZD2_ROBPS
STCa-24417 Lipoxygenase 24,34 12,79 Lypid metabolism B7Z177_PEA
STCa-5357 Phosphatidylinositol transfer-like protein III 8,12 11,94 Unknown Q94FN1_LOTJA
STCa-175 Transcription elongation factor 1 13,79 10,24 Transcription ELOF1_ARATH
STCa-7855 Abnormal suspensor SUS2 9,74 10,24 Unknown UPI000016331D
STCa-705 MAP kinase protein 8,12 10,24 Signal transduction Q9SMJ7_CICAR
STCa-5894 General substrate transporter 34,09 8,53 Transport A2Q5Z1_MEDTR
STCa-5877 Alternative oxidase 30,85 8,53 Redox homeostasis Q84KA1_CROSA
STCa-1885 Mob1-like protein 19,47 8,53 Cytokinesis Q2WBN3_MEDFA
STCa-170 Mob1-like protein 12,17 8,53 Cytokinesis Q2WBN3_MEDFA
STCa-16125 Cytochrome c oxidase subunit 6b 11,36 8,53 Redox homeostasis Q8LD51_ARATH
STCa-8434 Fiber protein Fb2 10,55 8,53 Unknown Q8GT87_GOSBA
STCa-18178 Probable histone H2A.2 9,74 8,53 DNA stability H2A2_MEDTR
STCa-15648 GR395157.1 C.arietinum EST 22,30 23,87 Uncharacterized -
STCa-19240 GR916593.1 C.arietinum EST 10,54 10,23 Uncharacterized -
STCa-11740 GR408054.1 C.arietinum EST 10,54 11,94 Uncharacterized -
STCa-15130 Contig45449 C.arietinum EST 8,11 8,53 Uncharacterized -
STCa-7445 Contig739 C.arietinum EST 17,84 10,23 Uncharacterized -
STCa-1958 No homologous EST 14,61 13,65 Un-annotated -
STCa-8135 No homologous EST 8,11 8.53 Un-annotated -
  1. Threshold in organ-wise differential expression: R(ln) 2.0 (8-fold)
  2. Threshold in stress-treatment differential expression: R(ln) 2.0 (8-fold)