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Table 3 Predicted C. arabica and C. canephora gene comparisons.

From: An EST-based analysis identifies new genes and reveals distinctive gene expression features of Coffea arabica and Coffea canephora

Coffea arabica

  

Species

# Hits*

% Hits

Vitis vinifera

13,855

43.29%

Arabidopsis thaliana

1,846

5.77%

Populus trichocarpa

1,161

3.63%

Oryza sativa

643

2.01%

Nicotiana tabacum

641

2.00%

Solanum tuberosum

428

1.34%

Solanum lycopersicum

392

1.22%

Medicago truncatula

149

0.47%

Catharanthus roseus

115

0.36%

Glycine max

104

0.32%

Others

1,941

6.06%

No hits

10,732

31.66%

Coffea canephora

  

Species

# Hits

% Hits

Vitis vinifera

7,427

44.57%

Arabidopsis thaliana

972

5.83%

Populus trichocarpa

639

3.83%

Oryza sativa

372

2.23%

Nicotiana tabacum

362

2.17%

Solanum tuberosum

232

1.39%

Solanum lycopersicum

225

1.35%

Medicago truncatula

105

0.63%

Solanum demissum

64

0.37%

Catharanthus roseus

56

0.32%

Others

1,231

7.39%

No hits

4,980

29.88%

  1. * Each coffee cluster was compared to all of the proteins from the organisms listed. The BLASTX score was defined as 1e-10.